| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0137 |
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| Symbol | |
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| ID | 4078742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 151103 |
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| End bp | 152278 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638005431 |
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| Product | histidine kinase |
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| Protein accession | YP_612132 |
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| Protein GI | 99079978 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00141334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.983928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGT CGATGCTCGA GAGTGAGGTC ACAGAGGCCT GGGCCGAACA ATACGAAACC
GCTTTTGTGA CATATTGCAA CACCGGCTCC GAGGAGGCTT TGATCGAAGC ATATGCCTTT
GCCCGGGAAG GTCTTGCTGC CAGCATGACC CTCGCAGTTT TTGCGTGTCT CCATCATGCA
GCATTTTTCA AGCTTCTCGA GCAATCCGGT CCGGGGAACA ATCTTTATGA ACGCGCATTG
GACTTTTATC TCGAAGGGGT CTCAGTGTTC GATATGGCCA TCCATGGGTA CCAAAACAAT
GTTGCGCGCC TCAAAGAAGA AGTCACAGAG CGACGGCGCA TAGAGGAAGA TCTGCGCGCC
GCCACCTTTG AGCTGTCTCG ACAACGCAGC GACCTCGACA TTCAAGTTCG CCAACGCACC
GCAGAGTTGC GAGAGAGGGC GGAGGAGCTG GAGCAGTCCA ATCGCTTGCT CCTCCAGACC
AACAAGGAGA CATCAGAGTT TTCCTACGCG CTGTCTCATG ACCTCAAATC TCCGATCAAC
ACGATAGGCA TGCTTCTTGA TGCTATCCGA GAGGAACTGC CACCAGACAG CGAATCCGAA
TGCGCAGACC TCGTATCGGA TGCATCGCTG ACAGCAGAGC GCATGAAGCG TCTGATCGAT
GATGTATTGC AATACTCGCA AGTCGTTGGA AACACGCTTG AACGGGAATT GGTCGACATG
AGCCAACTGT GCCAAGACGC CCTGTCTGAC ATGCGCCACG CGATCGACGA AGCACAAGCC
GATATCTCAT GCTCCCATCT CCCGGTCGTG CGCGGAAGCG CGTTTCAACT GGCTATCATG
CTGCGAAATT TCCTATCAAA CGCACTGACC TACCGCGATG CCTCTCGCCC CTTAAGGGTC
GAGATCTCAG CGGGACCCAC CGCAGAGACT GGCCGGGTTT TGATTTCGAT TGCCGACAAC
GGCATCGGCA TGCCACCAGA CTGCCATGCC CGGATTTTTA ACCTGTTCAC AAGGCTTCAC
ACTTACAGCG ATTTTGAAGG ATCCGGCATT GGGTTAGCAT TATGTAAACG CGTGGCAAAT
AATCATAACA GTGACATCGA AGTCGAATCC GTCGAGGGGC AAGGGACTAT ATTCAGCTTC
TCTATCGAAA GCGAGGAGGT TGATACATGG CATTAA
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| Protein sequence | MTMSMLESEV TEAWAEQYET AFVTYCNTGS EEALIEAYAF AREGLAASMT LAVFACLHHA
AFFKLLEQSG PGNNLYERAL DFYLEGVSVF DMAIHGYQNN VARLKEEVTE RRRIEEDLRA
ATFELSRQRS DLDIQVRQRT AELRERAEEL EQSNRLLLQT NKETSEFSYA LSHDLKSPIN
TIGMLLDAIR EELPPDSESE CADLVSDASL TAERMKRLID DVLQYSQVVG NTLERELVDM
SQLCQDALSD MRHAIDEAQA DISCSHLPVV RGSAFQLAIM LRNFLSNALT YRDASRPLRV
EISAGPTAET GRVLISIADN GIGMPPDCHA RIFNLFTRLH TYSDFEGSGI GLALCKRVAN
NHNSDIEVES VEGQGTIFSF SIESEEVDTW H
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