| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0127 |
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| Symbol | |
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| ID | 4078732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 134637 |
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| End bp | 135908 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005415 |
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| Product | DNA polymerase IV |
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| Protein accession | YP_612122 |
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| Protein GI | 99079968 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.314932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCC TATGCCGCGA ATGCCTGCAT TGTTTTGACC CCGGCACGTC ACCTCGCGGC
CCCAAACGCT GCCCGGTCTG CCGCAGCCCG CGCGTTAAGC AGCATGAGGA ACTCTTGTCG
CTCTCCATCG CGCATATGGA CTGTGATGCG TTTTATGCAA GTGTTGAAAA ACGCGATAAT
CCTGAGCTCG CAGACAAGCC GGTCATAATT GGCGGGGGGC ATCGCGGTGT GGTCTCCACG
GCCTGCTATG TGGCGCGCAT TCGCGGCGTT CGCTCCGCAA TGCCGATGTT TCAGGCGCTC
AAACTCTGCC CCGATGCAGT CGTGATCAAA CCCCGCATGG AGGTCTACGC CGAAACCAGC
CGCGCCATTC GCGCTATGAT GGACGAACTG ACACCTGAAG TAGAGCCGCT TTCTCTGGAT
GAGGCCTTCA TGGATCTCTC GGGCACAGAG CGGCTGCATG GCGCAGCGCC TGCCGTCATG
CTCGCGCGGC TTGTGAAGCG CATGAAGGAC GAATTGGGGG TCACGGGCTC CATTGGCCTC
AGCCATAATA AGTTCCTCGC CAAAGTGGCG TCCGACCTCG ACAAGCCGCG CGGGTTTTCC
GTAATCGGCA AAGCTGAAAC CGCGGAGTTT CTTCGCGACA AACCTGTGCG CCTCATCTGG
GGCATTGGCC CCGCTGCACA GGCTTCGCTC GAAAAGGCGG GTATCCGAGC CTTCTCTGAC
CTTCTGCGTT GGGAACGGCG CGATCTCCAT GACAGATTTG GCAGCATGGG AGATCGGCTC
TGGCATCTTG CGCGCGGCGA GGACCGCCGC AAGGTCTCTG CGCGCGCGCC GGTCAAATCC
ATCTCCAAAG AAACCACTTT CTTTGAGGAC ACGATGCATT CTGAGGTACT GGATGGCCAC
CTCTGGCGCC TCGCGGAACA GGTTTCAGAT CGCGCCAAGG CCAAAGGTCT CGCGGGACGG
GTGGTAACAC TGAAACTCAA GCGCGCGAAC CATTCGACCC TCACTCGGCG ACAGTCCCTG
CACAGCCCGA CGCAATATGC AGATCAAATC TATCGCACGG CGCGGCGCCT GTTGGACCAG
ACGATCCAGC AAGGCCCATT TCGATTGCTT GGTTGCGGCA TCAGCGAGTT GGCGCCCGAA
GCGCAAGCGG ATGCCACAGG GGACCTGCTG GACCCGGACG CAACCAAACG CGCCAATGCA
GAACGCGCGA CGGATGAGAT TCGCAAACGC TTTGGCAAAG AGGCGATCCG AAAAGGTCGG
TCACTTCGTT AG
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| Protein sequence | MPALCRECLH CFDPGTSPRG PKRCPVCRSP RVKQHEELLS LSIAHMDCDA FYASVEKRDN
PELADKPVII GGGHRGVVST ACYVARIRGV RSAMPMFQAL KLCPDAVVIK PRMEVYAETS
RAIRAMMDEL TPEVEPLSLD EAFMDLSGTE RLHGAAPAVM LARLVKRMKD ELGVTGSIGL
SHNKFLAKVA SDLDKPRGFS VIGKAETAEF LRDKPVRLIW GIGPAAQASL EKAGIRAFSD
LLRWERRDLH DRFGSMGDRL WHLARGEDRR KVSARAPVKS ISKETTFFED TMHSEVLDGH
LWRLAEQVSD RAKAKGLAGR VVTLKLKRAN HSTLTRRQSL HSPTQYADQI YRTARRLLDQ
TIQQGPFRLL GCGISELAPE AQADATGDLL DPDATKRANA ERATDEIRKR FGKEAIRKGR
SLR
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