| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0113 |
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| Symbol | |
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| ID | 4078698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 119466 |
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| End bp | 121451 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005400 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_612108 |
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| Protein GI | 99079954 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTCAGA CCGCTGCGCA GACATCGTCT GGCGCCGGGC AGCTTATGTC TGTTCCGGCC
CTGCTGGAGA GAAACGCAAC TGTCCATGCC AACCGCCCGG CCTACCGGGA AAAAGAGTTT
GGCATCTGGC AAAGTTGGAC CTGGAAAGAA ACCGCCGAGG AAATCGAGGC GCTGGCGCTT
GGGTTGATGA ATCTTGGTGT GGCCGAGGGA GATTTCATTG CTATCATCGG ACGCAACCGG
CCATCGCTCT ATTGGTCGAT GGTGGCGGCA CAGAGCGTCG GTGCAGTGCC GGTGCCGGTC
TATCAGGACT CAAGTGCCGA GGAGATGGCC TATGTGCTGG ATCACTGCGG TGCGGCCTAT
GTGATTGCGG GCGATCAGGA ACAGGTCGAC AAGGTGCTGG AGGTTCAGGA CACGCTGACC
AACCTCAAGC ATATGATCTA TGTGGACCCC AAGGGTCTGC GCAAATACGA CCACCACCAG
CTGCATCAAT ACAGCCACGT GCAGGAACAG GGCCGCGCCG CGCGCGATGA GCTCAGCTCG
GATCTTGCGG CGCGTAAGGC GAAGCTCACG TATGATAGCA CCTGCGTGAT GCTCTATACG
TCGGGCACCA CGGGGCGCCC CAAGGGCGTT GTGCTGTCCA ATCGCAACGT GATCGAGAGC
GCCAAGAACG CCAGCACCTT TGACAAGCTC ACCGAGAATG AAGACATCCT GTCCTACCTG
CCAATGGCTT GGGTCGGGGA TTTCATCTTC TCGCTGGGAC AGTCCTACTG GTGCGGGTTC
TGCGTCAATT GCCCCGAGAG CGAAGACACC ATGATGACCG ATCTGCGTGA GATCGGCCCA
ACTTATTTCT TTGCACCGCC GCGCGTGTTT GAGGGTCAGC TCACCAATGT GATGATCCGC
ATGGAAGACG CGGGTAAGCT CAAGCAGAAG ATGTTTCATC ACTTCTTGGC CCATGCCAAG
AAAGTCGGCG GCCTGATCCT GGATGGCAAA CCTGTCGGCA TGATGGATCG CCTGAAGTAT
CGCCTTGGGG ATCTCTTGGT TTACGGTCCC CTGAAGGATA CGCTTGGCTA TGGTCGCATT
CGCGTCGGCT ACACCGCCGG TGAGGCGATT GGACCGGAGA TTTTTGATTT CTACCGCTCG
CTGGGGATCA ATCTCAAACA GCTTTATGGT CAGACAGAGG CCACGGTGTT CATTACTGTG
CAGCCTGATG GCGAAGTGCG CGCGGATACG GTGGGCGTGC CCGCACCGGA TGTGGAGATC
AAGATCGACG ACAAGGGTGA GATCCACTAC CGCTCGCCGG GGACCTTTGT GGAATACTAC
AAGAATGCGG AATCCACCGC TTCGACAAAG GACGCCGAGG GCTGGGTCGC CACGGGTGAT
GCGGGCTTTA TCGAGGAAAG CTCCGGCCAT CTGCGGATCA TCGACCGCGC CAAGGATGTC
GGCAAAATGG CCAGCGGCGC GATGTTTGCG CCCAAGTACG TCGAGAACAA GCTGAAGTTC
TATCCTGACA TTCTCGAGGC CGTGCTATTT GGCAACGGCC GGGATCGCTG TGTGGCCTTT
ATCAACATCG ACCTCACGGC GGTGGGCAAC TGGGCAGAGC GCAACAATAT TGCCTACGCC
TCCTATCAGG AGCTCGCAGG CCACCCGCGC GTGCTGGAGA CCATCCGCAA CCATGTTGAG
GCGGTGAATG TCTCAGTCGC GCAGGATGAG ATGCTGTCTG GCTGTCAGGT GCATCGCTTC
GTGGTGCTAC ACAAGGAGCT CGATGCCGAT GATGGCGAGA TGACCCGCAC CCGCAAGGTG
CGCCGTCGCA TCGTCGAGGA GAAATTCGCC GACATTATTG CCGCGCTTTA TGATGGTTCC
GAGCAGATCT CGACCCGGAC CGAAGTGACA TATGAAGACG GTCGCAAAGG CGCGATCAGT
GCAACGCTGA CCTGTGTGGA TGCGAAGGTG CAATCGCCCA TGGCGCAGCA GGTGGCAGCG
GAATGA
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| Protein sequence | MSQTAAQTSS GAGQLMSVPA LLERNATVHA NRPAYREKEF GIWQSWTWKE TAEEIEALAL
GLMNLGVAEG DFIAIIGRNR PSLYWSMVAA QSVGAVPVPV YQDSSAEEMA YVLDHCGAAY
VIAGDQEQVD KVLEVQDTLT NLKHMIYVDP KGLRKYDHHQ LHQYSHVQEQ GRAARDELSS
DLAARKAKLT YDSTCVMLYT SGTTGRPKGV VLSNRNVIES AKNASTFDKL TENEDILSYL
PMAWVGDFIF SLGQSYWCGF CVNCPESEDT MMTDLREIGP TYFFAPPRVF EGQLTNVMIR
MEDAGKLKQK MFHHFLAHAK KVGGLILDGK PVGMMDRLKY RLGDLLVYGP LKDTLGYGRI
RVGYTAGEAI GPEIFDFYRS LGINLKQLYG QTEATVFITV QPDGEVRADT VGVPAPDVEI
KIDDKGEIHY RSPGTFVEYY KNAESTASTK DAEGWVATGD AGFIEESSGH LRIIDRAKDV
GKMASGAMFA PKYVENKLKF YPDILEAVLF GNGRDRCVAF INIDLTAVGN WAERNNIAYA
SYQELAGHPR VLETIRNHVE AVNVSVAQDE MLSGCQVHRF VVLHKELDAD DGEMTRTRKV
RRRIVEEKFA DIIAALYDGS EQISTRTEVT YEDGRKGAIS ATLTCVDAKV QSPMAQQVAA
E
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