Gene TM1040_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0109 
Symbol 
ID4078694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp115503 
End bp116159 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content60% 
IMG OID638005396 
Productphosphoglycerate mutase 
Protein accessionYP_612104 
Protein GI99079950 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAA TCACACTGGT CCGTCACGGC CAGGCCAATA CCGCGGCACG GGATGAAGCC 
AGCTACGACA AGCTGAGCCC CCTTGGCCAT CAGCAAGCGC AATGGCTCGG CGACCATCTG
CGCGACTGCA AAGACCATTA CGCACGCGTC TATTGTGGTA CCCTGACCCG GCACGAGGAA
ACCGCCCGCG CCATGGGGTT CGACGCAGGT GATATCATCC GTGATCCCCG CCTCAACGAA
ATGGAATACT TTACGCTTGC ACAGGCGATG GAAGCTCAGC ACGGGCTGGC CATTCCCAAG
GAGCGTGAGG GCTTTGTCGC CCATCTGCCA AAGGTTTTTG CCGCGTGGGA AGCAGACTGT
ATCGATACCC CTCCCGAAAG CTGGCGCGAC TTTGAAACCC GCACCAAAGC CGCCTTGGCA
GAGATCTCAG AAGGCGAAGG CCCTGCTCTG GTGGTCACCT CCGGCGGGTT GATTTCCATG
GTGATGCGTC AGTGCCTTGG ATTGGATACT GCCGCCACAG CACGCATCGC GCTTGCGATC
ATGAACACCT CGCTGCACCG TCTGCACAAC ATCGGCGGCA CCTATGCGCC AGTGCTGTTC
AACGGTGTCC CGCATCTCCA AGCCCCCGAT CGCCAGTATG CGCGCACCCA TCTCTGA
 
Protein sequence
MSEITLVRHG QANTAARDEA SYDKLSPLGH QQAQWLGDHL RDCKDHYARV YCGTLTRHEE 
TARAMGFDAG DIIRDPRLNE MEYFTLAQAM EAQHGLAIPK EREGFVAHLP KVFAAWEADC
IDTPPESWRD FETRTKAALA EISEGEGPAL VVTSGGLISM VMRQCLGLDT AATARIALAI
MNTSLHRLHN IGGTYAPVLF NGVPHLQAPD RQYARTHL