Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0095 |
Symbol | |
ID | 4078761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 98540 |
End bp | 99913 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638005382 |
Product | peptidase M16-like |
Protein accession | YP_612090 |
Protein GI | 99079936 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.212806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCT TCAAGACAGC CCGACGTGCG CGTGCTTTTG ACATGCGTCC CGTGAAACGC GCCCTGATGG CGCTATGCCT CGGGTTTGCA CTAATGTTCG CTGCGCAGAT GGCGCGGGCG GAGATTGACA TCAAGGAAGT GACCTCGCCT GGCGGCATCA AGGCTTGGCT GGTCGAAGAT CACAGTATCC CCTTCGCGGC GCTGGAACTG CGGTTCCGGG GCGGCACCTC GCTGGATGCG CCCGGAAAAC GCGGGGCCGT GCATCTGATG GGCGGGCTCC TCGAAGAGGG GGCAGGGGAG CTGCGTGCGC AGGACTATGC CCGCGCGCTT GAGGCCCTTG CTGCAGATTT TTCCTATGAC GCGGACAAGG ACACGGTTTC AATTTCTGCA AGTTTCCTCA GCGAGAACCG GGATGACGTG ATGGAGCTCT TGCGCCAGAC CATTCAGGAA CCACGGTTTG ATCAGGACGC TTTGGATCGG GTGCGTGCGC AGGTGCTTGT GGGCTTGCGT TCGGACCAGA CCGACCCAAA TGCGATTGCG GGCAAGACCT TTGCCCAGCA GGCCTTTGGC GATCATCCCT ATGGCAGCGA TGGCAAAGGC ACCATCGAGA GTGTCTCGGC GCTCACGCGT CAGGATATGT TTGCCGCGCA TGAGGCAGTG TTTGCCCGCG ATCGGCTTTA TGTGAGCGCG GTGGGCGACA TCACCCCCGA AGCCTTGGGG GCGTTGCTCG ACGAGCTTTT GGGCGATCTC CCTGCCGAGG GTGCGCCGAT GCCCGGTCCG GCAGAAGTCC TGTTGACCGG GGGGACCACC GTGGTTCCCT TTGCAACGCC GCAATCGGTG GCGCTCTTTG GGCAGAAGGG TATGGATCGA AACGATCCCG ACTTCTTTGC CGCTTATGTG CTTAACCAGA TTTTGGGCGG TGGGTCGTTT GAAACCCGCC TGATGCAAGA GGTACGCACC AAGCGGGGCC TCACCTACGG TGTCTATAGC TATCTGGTGC CGCGGGATCT GGCTGCCACC TACATGGGCT CATTTGCCTC TGCCAATGAG AAAATGGCCG AAGCGGTGGG CGTGGTGCGC GATCAGTGGC AGGCTCTGGT CGAGAGCGGT GTCACGGAGG CGGAGTTGCA GGACGCCAAG ACCTATCTGA CGGGTGCCTA TCCCCTGCGG TTCAATGGTA ACAGCCAGAT TGCATCGATC CTTGTGGCGA TGCAGATGGA CGGGCTTTCG ACCGATTACG TGGTGACCCG CAACCAGAAG GTCGAGGCGG TGACGCTTGA GGATGTGAAC CGGGTCGCCA AAGAGCTGCT TGATCCCGAA GGGCTGCGAT TTGTGGTCGT CGGAGAGCCC GAGGGGCTGA GTTCTACGGA TTAA
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Protein sequence | MSRFKTARRA RAFDMRPVKR ALMALCLGFA LMFAAQMARA EIDIKEVTSP GGIKAWLVED HSIPFAALEL RFRGGTSLDA PGKRGAVHLM GGLLEEGAGE LRAQDYARAL EALAADFSYD ADKDTVSISA SFLSENRDDV MELLRQTIQE PRFDQDALDR VRAQVLVGLR SDQTDPNAIA GKTFAQQAFG DHPYGSDGKG TIESVSALTR QDMFAAHEAV FARDRLYVSA VGDITPEALG ALLDELLGDL PAEGAPMPGP AEVLLTGGTT VVPFATPQSV ALFGQKGMDR NDPDFFAAYV LNQILGGGSF ETRLMQEVRT KRGLTYGVYS YLVPRDLAAT YMGSFASANE KMAEAVGVVR DQWQALVESG VTEAELQDAK TYLTGAYPLR FNGNSQIASI LVAMQMDGLS TDYVVTRNQK VEAVTLEDVN RVAKELLDPE GLRFVVVGEP EGLSSTD
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