| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0092 |
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| Symbol | |
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| ID | 4078758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 95835 |
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| End bp | 96317 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005379 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_612087 |
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| Protein GI | 99079933 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.142417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAGCT ATGCGCTGTA TCTTGCGGCC CTCATTGCGC TGATCGTGGA TCAGGCCACC
AAGATCGGAG TCGTCTTCGG CCTCGATCTG GTGCGTGTGC TGCGCATTGA TGTGGCTCCG
CCCTTGCTCA ACTTTCGCTA TGGCGAAAAC CGGGGCATCA ATTTTGGTCT GTTCAATGAT
GGCGGCGATT CCAGCCGCTG GATCTTGATC GGGATCTCTT TGATAATCTG TGCTGCGGTG
TTCCTCTGGG TGCGCCGCAG CCACGCCAAC AGTCGCCTGA TGCTGATCAG CGCGGGGCTG
GTCATCGGCG GCGCGCTCGG CAATGTGCTG GACCGGGTGC TCTATGGCTA TGTGCTCGAT
TTTCTCAACA TGTCGTGCTG CGGGATCAAC AACCCTTATG TGTTCAATGT CGCGGATGTG
TTCATTTTTG CGGGAGCGGC AGGGTTGATC CTGTTTGAAG GCCGCGCAAA AAAGCCCGCG
TGA
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| Protein sequence | MRSYALYLAA LIALIVDQAT KIGVVFGLDL VRVLRIDVAP PLLNFRYGEN RGINFGLFND
GGDSSRWILI GISLIICAAV FLWVRRSHAN SRLMLISAGL VIGGALGNVL DRVLYGYVLD
FLNMSCCGIN NPYVFNVADV FIFAGAAGLI LFEGRAKKPA
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