Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0087 |
Symbol | |
ID | 4078753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 89693 |
End bp | 90502 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638005374 |
Product | dihydrodipicolinate reductase |
Protein accession | YP_612082 |
Protein GI | 99079928 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0289] Dihydrodipicolinate reductase |
TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGATA AACCAGGGAT CGTGATCACC GGCGCTTCGG GGCGCATGGG GCAAATGCTG ATCAAGACGG TGCTGGACAG CGACAAAGCC GAACTTGCCG GTGTGGTCGA GCGCGAAGGC CACGACTGGG TCGGTCAGGA TATTGGTATC GCAATGGGGG GCGCGGCCCT TGGGGTTGTG GTCACCGACG ATGCGGGCTC GGCCTTCGCG GGCGCACAGG CGGTCATTGA TTTTACCGCA CCACAGGCCA CGATCGCCTT TTCCAAACTG GCCGCAGAGG CTGGCTGCGT ACATGTGATC GGAACCACGG GCATGAGCGA GGCGGAAATC GCCCAGCTGG ATCCCGCGGC CCAGGACACG GTTCTGGTCC GCGCCGGAAA CATGTCTCTG GGCGTTAACC TGTTGGTTCA ACTGACCAAA AAGGTCGCCG CCGCACTCGA CGAAGATTTC GATATCGAAG TGATCGAGGC ACATCACCAC CACAAGGTGG ACGCGCCCTC GGGCACCGCA TTGATGCTTG GGGAAGCTGC GGCAGAGGGC CGCGGTGTGG CGCTTGCCGA GGTTTCGGAT CGGGGGCGTG ATGGGATCAC GGGTGCACGC AAAAAAGGCG ACATTGGTTT CTCGGCCATT CGCGGTGGCG ACATCGTCGG CGAGCATGAC GTTCTTTTTG CAGCGGCGGG CGAGCGCATC GTGCTGCGCC ATATGGCCAC AGATCGCGCG ATCTTTGCCC GTGGCGCACT CAAGGCCGCG CTTTGGGGAC AAGGCAAAGA CGCCGGCGCC TACGACATGA TTGATGTTCT CGGGCTTTGA
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Protein sequence | MTDKPGIVIT GASGRMGQML IKTVLDSDKA ELAGVVEREG HDWVGQDIGI AMGGAALGVV VTDDAGSAFA GAQAVIDFTA PQATIAFSKL AAEAGCVHVI GTTGMSEAEI AQLDPAAQDT VLVRAGNMSL GVNLLVQLTK KVAAALDEDF DIEVIEAHHH HKVDAPSGTA LMLGEAAAEG RGVALAEVSD RGRDGITGAR KKGDIGFSAI RGGDIVGEHD VLFAAAGERI VLRHMATDRA IFARGALKAA LWGQGKDAGA YDMIDVLGL
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