| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0081 |
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| Symbol | rpsO |
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| ID | 4078747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 85005 |
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| End bp | 85274 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638005368 |
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| Product | 30S ribosomal protein S15 |
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| Protein accession | YP_612076 |
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| Protein GI | 99079922 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0184] Ribosomal protein S15P/S13E |
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| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGATCA CTGCAGAAGA AAAAACACGC CTGATGAAAG AATTCGCGAC CAAAGAGGGC
GACACCGGTT CTCCGGAAGT CCAGGTCGCA ATCCTGACCT CGCGCATCAA CACGCTCACC
GAGCACTTCA AAACCCACAA AAAAGACAAC CATGGCCGCC GTGGTCTTCT GAAAATGGTT
GCTCAGCGCC GTAAGCTGCT GGACTACCTG AAGGGCAAAG AAGAAGCGCG CTATCAGGAC
CTGATCAAGA AACTGGGCAT CCGTCGCTAA
|
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| Protein sequence | MSITAEEKTR LMKEFATKEG DTGSPEVQVA ILTSRINTLT EHFKTHKKDN HGRRGLLKMV
AQRRKLLDYL KGKEEARYQD LIKKLGIRR
|
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