| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0076 |
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| Symbol | |
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| ID | 4075973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 78842 |
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| End bp | 79999 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005363 |
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| Product | lipopolysaccharide biosynthesis protein-like |
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| Protein accession | YP_612071 |
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| Protein GI | 99079917 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.39731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGC CTCTATGGAA GATCAAACGC GAGCTGAAGC GTCAAGGCAG GCAGCTAAAG
AACATTGGGC CTCGTCTTGC GAGCCTTTTG TTTTCGCGGA CCTATTATGA TCTATTCCTT
TCTGGAAAGA AGACCGTCAC CGAAGGTCAG ATCCCCAAGC GTCCAAAGGT CGCGGTCTAC
CTGATCTTTC CAAGCTCCGG CATTCTCGGG TCTCATATCG AGGCGCTGCG GTATCTTGCA
CAGAACGGAT ACGCGCCCGT CGTGGTCTCA AACCTGCCCC TTGATGAGGG CGACCTTGAA
CACCTGCGCG CTCATGCGCA TCTCGTCATC CAGCGTCCGA ACTATGGCTA TGATTTTGGC
GGCTACCGCG ATGGTGTTCT TGAGGTCGCC GCGCGTCACA CAAGCGTGGA GCGTTTTGTC
CTGCTCAACG ATTCTGCCTG GTTCCCCTTG CCTGGGTCGC GCAATTGGCT GGCCGATGCC
GAAGCGCTGG AGCTGGATTT CGCGGGTGCG GCGACGAACT ATGGCCACAC GCGGGTCGAT
CCGAAGAATT TCCGGGACAT CCGCTGGCAC TATTCCAGCA ATCACCGCAA CTTTCACTAC
TGCTCCTTCG CTTTGATGAT GAGCGGGAAG CTGTTCAACG ATAAGCGGTT TCAGCGCTTC
TGGAAGAGCT TTCCGCTCAC CAATGACAAG ACCGTCACGG TAAGGCGGGG CGAGATTGGC
CTCACGAAAT GGGTCATCCA GCAAGGTTTC TCGCATGGCT CTACGCTCGA TATTGCCGCG
CTTGATCAAA GGCTGGCTGA ATATGGCATA GATGAGCTGC GCGCGATTGC CGCGCAGACC
CTGATGCCGC AGAGCCCCTC GATGAAAGAG GTCCTGGAAG ACACCGTCCG CTCGGCAGAG
AGCAAAGAAG ATTTGGTCAA CGTGATCCTG ACTGCGATCG CGAGGAAAGG CATCAGCTAT
GCGCAACCTC GTCTGATCCA CCGTGACTAC GGGTTCGCGT TCCTCAAGAA ATCGCCGCTT
TGGCTGGATG AGGATGCCTC AAACCTGACC CTCGCCTTCA CCCGCGACCT TGATGGAGAA
TTTGGCAAAG TCCTGCAGGC TGAGGCATTG GACCTGCGCC GGACAAGAGC GGCGGAATTT
GCACCCGCCC CGGACTGA
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| Protein sequence | MSLPLWKIKR ELKRQGRQLK NIGPRLASLL FSRTYYDLFL SGKKTVTEGQ IPKRPKVAVY
LIFPSSGILG SHIEALRYLA QNGYAPVVVS NLPLDEGDLE HLRAHAHLVI QRPNYGYDFG
GYRDGVLEVA ARHTSVERFV LLNDSAWFPL PGSRNWLADA EALELDFAGA ATNYGHTRVD
PKNFRDIRWH YSSNHRNFHY CSFALMMSGK LFNDKRFQRF WKSFPLTNDK TVTVRRGEIG
LTKWVIQQGF SHGSTLDIAA LDQRLAEYGI DELRAIAAQT LMPQSPSMKE VLEDTVRSAE
SKEDLVNVIL TAIARKGISY AQPRLIHRDY GFAFLKKSPL WLDEDASNLT LAFTRDLDGE
FGKVLQAEAL DLRRTRAAEF APAPD
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