Gene TM1040_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0066 
Symbol 
ID4075963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp70543 
End bp70887 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content58% 
IMG OID638005353 
Productanti-sigma-factor antagonist 
Protein accessionYP_612061 
Protein GI99079907 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.517234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTA CGAGCACGGA AGCAGGCGGC GCACAAGTGG TGACGGTGAA TGCCCAGCGC 
ATTGACGCGG CCATGGCGAT CCAATTCAAA GAAGACATGC GCACGGAAAC CGAAGCTGGT
CCGTCGCGGG TGATCCTCGA CCTCTCCCAT GTGGAATTCA TTGATTCGAG CGGGCTGGGC
GCGATCGTCG CCGCGATGAA ACAGCTCGGC AAGGATCGCA AACTCGATCT CGCGGGGCTT
ACCCCGATGG TCGACAAGGT GTTTCGCCTG ACGCGGATGG ACACCGTCTT TAGCCTGTTC
GACACACTGC AAGAAGCGCT CGATACTGAG CATGCAGAGA ATTGA
 
Protein sequence
MSLTSTEAGG AQVVTVNAQR IDAAMAIQFK EDMRTETEAG PSRVILDLSH VEFIDSSGLG 
AIVAAMKQLG KDRKLDLAGL TPMVDKVFRL TRMDTVFSLF DTLQEALDTE HAEN