Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0066 |
Symbol | |
ID | 4075963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 70543 |
End bp | 70887 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638005353 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_612061 |
Protein GI | 99079907 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.517234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTTA CGAGCACGGA AGCAGGCGGC GCACAAGTGG TGACGGTGAA TGCCCAGCGC ATTGACGCGG CCATGGCGAT CCAATTCAAA GAAGACATGC GCACGGAAAC CGAAGCTGGT CCGTCGCGGG TGATCCTCGA CCTCTCCCAT GTGGAATTCA TTGATTCGAG CGGGCTGGGC GCGATCGTCG CCGCGATGAA ACAGCTCGGC AAGGATCGCA AACTCGATCT CGCGGGGCTT ACCCCGATGG TCGACAAGGT GTTTCGCCTG ACGCGGATGG ACACCGTCTT TAGCCTGTTC GACACACTGC AAGAAGCGCT CGATACTGAG CATGCAGAGA ATTGA
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Protein sequence | MSLTSTEAGG AQVVTVNAQR IDAAMAIQFK EDMRTETEAG PSRVILDLSH VEFIDSSGLG AIVAAMKQLG KDRKLDLAGL TPMVDKVFRL TRMDTVFSLF DTLQEALDTE HAEN
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