Gene TM1040_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0065 
Symbol 
ID4075962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp70069 
End bp70509 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content59% 
IMG OID638005352 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_612060 
Protein GI99079906 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.459983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAGA CTTTCGCCTG CTCCTTCAGG GCGACCGAGA TTGAAGCCCG ACGCGGCATC 
GTTTTGGTGG TTCAGCGGCT GAAGGACATG GGTATTGCCG ATACCCGGGT CGACGAGGTG
CAGATCGCCC TCGCCGAGGC TGTGAATAAC GTTGTCGAAC ATGCCTATGC CGAAACGGCG
ACGGGTGATG TTCTCATACG CTGCAACCTC CATTCCGACC GCCTGTGGGT AGAAATACGC
GACGCGGGCA CGCCGTTCCC CGATGCCAAA CTTCCCGAAG GCAAGCCCGC GTTGGTGGAT
CCGAGCACGC CGCTCGAAGA TCTGCCCGAA GGTGGCTTTG GCTGGTTCTT GATCCGTGAG
CTGGCAAGCG ACATCCAGTA CCAGCGCAAT CCTGACAACA ACCAGCTGTC GCTGTGCTTT
GAGATCCAGC TCACGCAATA A
 
Protein sequence
MVETFACSFR ATEIEARRGI VLVVQRLKDM GIADTRVDEV QIALAEAVNN VVEHAYAETA 
TGDVLIRCNL HSDRLWVEIR DAGTPFPDAK LPEGKPALVD PSTPLEDLPE GGFGWFLIRE
LASDIQYQRN PDNNQLSLCF EIQLTQ