Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0059 |
Symbol | |
ID | 4078722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 61934 |
End bp | 63112 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638005346 |
Product | aminotransferase |
Protein accession | YP_612054 |
Protein GI | 99079900 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.419945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTC CCGAGCGGTT TGCCCATCTG CCGCCCTACG CGTTTCCGCG TTTGCGTGCG CTTCTTGACC ATCACGCGCC TGGTGGCGAT GTGGTGCAAT TGACCATTGG CGAACCAAAA CACGAATTCC CCGCATGGGT GACGGATGTG ATCGTAGAGA ATGCCTCCGC GTTCAACAAC TACCCGCAAA ACGAAGGCAG CGATGCGCTG CGCGGTGCGA TGGCCGACTG GGCTGCGCAA CGCTATGGTG TGACGCTTGA TCCTGCGACA CGCGTGATGG CGCTGAACGG TACTCGCGAG GGTCTTTACA ATGCGGCGAT GGCACTATGC CCCGAGGAAA AGAACGGCCA GCGCCCGGTG GTGTTGATCC CGAACCCCTT TTATCAGGTC TATATGATCG CGGCGATTTC GGTGGCGGCG GAGCCGGTCT TTGTGCCAGC AACCGATGAG ACCGGCCATC TGCCGGACTA TGCATCGCTG CCCGAAGAGG TGCTGAACCG CACCGCGATA GCCTATATCT GCTCGCCCGC AAACCCGCAG GGGGCCGTGG CCTCGCGGGA GTATTGGCAG CAGCTTTTTG CGCTTGCCGA AAAATACGAT TTCAAGGTCT TTGCGGATGA GTGCTACTCG GAGATCTACC GGGACACTGC ACCGGTTGGT GCACTCACCG TTGCCGATGA AATGGGTCTC GATCCCGAAC GCGTGGTTCT GTTCAACTCG CTGTCCAAGC GGTCCAACCT GCCGGGGCTG CGCTGTGGTC TTCTGGCTGG TGGACCAGAG ACGCTGGTGC AGGTCAAGAA ACTGCGCGCC TACTCCGGCG CGCCCATTCC TGGCCCCTTG CAGGCGGCGG CCGCAAAGGT CTGGGCGGAC GAGGTACATG TCGCCGAAAA CCGCGCGCTC TATCAGGAAA AATACCGGAT CGCGGACGAG GTCTTTGCGG GTCTCAATGG CTACATGTCA CCCGAAGCGG GCTTCTTTTT GTGGTTGCCG GTCGAAGATG GCGAGGCTGC AACCCTGAAG CTTTGGCAGG AGACAGGTGT ACGGGTCTTG CCCGGCGCGT TCCTGGCCCA AGGAAAGGGA GCGGAAAACC CCGGCCACGG ATATATCCGC GTGGCGCTGG TTGCGTCCGA AGAGCAAACC CGCGCATCAC TGCAGCTGTT GCGCGATTGT CTCTACTAG
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Protein sequence | MKFPERFAHL PPYAFPRLRA LLDHHAPGGD VVQLTIGEPK HEFPAWVTDV IVENASAFNN YPQNEGSDAL RGAMADWAAQ RYGVTLDPAT RVMALNGTRE GLYNAAMALC PEEKNGQRPV VLIPNPFYQV YMIAAISVAA EPVFVPATDE TGHLPDYASL PEEVLNRTAI AYICSPANPQ GAVASREYWQ QLFALAEKYD FKVFADECYS EIYRDTAPVG ALTVADEMGL DPERVVLFNS LSKRSNLPGL RCGLLAGGPE TLVQVKKLRA YSGAPIPGPL QAAAAKVWAD EVHVAENRAL YQEKYRIADE VFAGLNGYMS PEAGFFLWLP VEDGEAATLK LWQETGVRVL PGAFLAQGKG AENPGHGYIR VALVASEEQT RASLQLLRDC LY
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