Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0053 |
Symbol | |
ID | 4078716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 56222 |
End bp | 57010 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638005340 |
Product | exodeoxyribonuclease III |
Protein accession | YP_612048 |
Protein GI | 99079894 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.809091 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTTA CCCTTGCCAC ATGGAACATC AACTCCGTGC GTCTACGCGA ACCGATCGTT GTCAAGCTGC TCGAAGAGGA AGGGCCGGAT GTTCTCTGTC TTCAGGAGTG TAAGAGCCCG GTGGACAAGA TCCCGATGGA GGCCTTTCGC GCGCTGGGCT ACGAGCATAT GATCGCGCGG GGGCAGAAGG GCTATAACGG CGTGGCGATC CTGTCGCGCC TGCCGATTGA GGATGTCGGC GACAAGGATT TCGCCAGCCT GGGTCACGCC CGCCATGTGG CGGGTCGGTT GGAGAATGGT GTCACAATCC ATAACTTTTA TGTCCCTGCG GGGGGCGACG AGCCCGACCG CGAAAAGAAT GTGAAGTTTG GCCAGAAACT CGATTACCTC ACGGAGATGC GGGATTGGTT CCATGCGGAA CGTCCCGAGA AGTCGGTATT GGTCGGTGAT CTCAACATCG CGCCGCGCGA GGATGACGTG TGGGATCACA AGAAGCTTTT GAAGGTGGTG AGCCACACGC CCATTGAGGT GGAGCATCTG GATCAGGTGA TGGACGCGGG CGGATGGGCC GATGTGACAC GCAAGGACAT CCCCGAAGGG CAGCTTTATA GCTGGTGGAG CTATCGGGCA AAGGATTGGG ATGCGGCTGA CAAAGGGCGT CGCCTCGATC ATGTATGGAC AACGGCGGAT ATTACCAATG CCGCCCACTC CAGCCGGATC TTGCGCCATG CGCGCGGCTG GGAGAAACCC AGCGATCATG CGCCGGTCTT TGCCACCTTT GATCTCTGA
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Protein sequence | MSFTLATWNI NSVRLREPIV VKLLEEEGPD VLCLQECKSP VDKIPMEAFR ALGYEHMIAR GQKGYNGVAI LSRLPIEDVG DKDFASLGHA RHVAGRLENG VTIHNFYVPA GGDEPDREKN VKFGQKLDYL TEMRDWFHAE RPEKSVLVGD LNIAPREDDV WDHKKLLKVV SHTPIEVEHL DQVMDAGGWA DVTRKDIPEG QLYSWWSYRA KDWDAADKGR RLDHVWTTAD ITNAAHSSRI LRHARGWEKP SDHAPVFATF DL
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