Gene TM1040_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0046 
Symbol 
ID4078709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp49724 
End bp50212 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content60% 
IMG OID638005333 
Producthypothetical protein 
Protein accessionYP_612041 
Protein GI99079887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.185618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGGTA TCAAGACCTT TTTCCTTCTT TCAGCGCTGG CTGTCACAGC CTCCTGCGGT 
GCATTTCGGT CATTGGACAC CAGCACAGAG GTCAATGACA CCGATACCAT CGTCCTTGCG
GGCGAAGGCC GCGAAGCCAA CGACGACAAG ACGACGATCT GGGAAGCCTT CGGGCCGCGC
AAAAGCGAAC AGCGCGTTCA GGTGAATCGC TATCTCTGGG CCGCAAGCCT GGAGGTTCTG
GATTTCCTGC CTGTTCAATC CGTCGATCCC TTCACCGGTG TGATCATCAC CGGATATGGC
ACGCCCCCGG GTGGCGGTCG CGCATATCGC GCGACGATTC ACATCAAAGA CCCTGCTCTT
GAAGCGCGCG CATTGAATGT CGCGCTCCAG AGCCGCGGTG GCGCCGTCAG CTCCGCGACC
GCACGCGCTG TTGAGGATGC GATTCTCTCT CGCGCGCGCC AACTACGCAT GGCCGACAAG
AAGATCTGA
 
Protein sequence
MRGIKTFFLL SALAVTASCG AFRSLDTSTE VNDTDTIVLA GEGREANDDK TTIWEAFGPR 
KSEQRVQVNR YLWAASLEVL DFLPVQSVDP FTGVIITGYG TPPGGGRAYR ATIHIKDPAL
EARALNVALQ SRGGAVSSAT ARAVEDAILS RARQLRMADK KI