Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0046 |
Symbol | |
ID | 4078709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 49724 |
End bp | 50212 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638005333 |
Product | hypothetical protein |
Protein accession | YP_612041 |
Protein GI | 99079887 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.185618 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGGTA TCAAGACCTT TTTCCTTCTT TCAGCGCTGG CTGTCACAGC CTCCTGCGGT GCATTTCGGT CATTGGACAC CAGCACAGAG GTCAATGACA CCGATACCAT CGTCCTTGCG GGCGAAGGCC GCGAAGCCAA CGACGACAAG ACGACGATCT GGGAAGCCTT CGGGCCGCGC AAAAGCGAAC AGCGCGTTCA GGTGAATCGC TATCTCTGGG CCGCAAGCCT GGAGGTTCTG GATTTCCTGC CTGTTCAATC CGTCGATCCC TTCACCGGTG TGATCATCAC CGGATATGGC ACGCCCCCGG GTGGCGGTCG CGCATATCGC GCGACGATTC ACATCAAAGA CCCTGCTCTT GAAGCGCGCG CATTGAATGT CGCGCTCCAG AGCCGCGGTG GCGCCGTCAG CTCCGCGACC GCACGCGCTG TTGAGGATGC GATTCTCTCT CGCGCGCGCC AACTACGCAT GGCCGACAAG AAGATCTGA
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Protein sequence | MRGIKTFFLL SALAVTASCG AFRSLDTSTE VNDTDTIVLA GEGREANDDK TTIWEAFGPR KSEQRVQVNR YLWAASLEVL DFLPVQSVDP FTGVIITGYG TPPGGGRAYR ATIHIKDPAL EARALNVALQ SRGGAVSSAT ARAVEDAILS RARQLRMADK KI
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