| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0041 |
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| Symbol | |
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| ID | 4076308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 43680 |
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| End bp | 44879 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005328 |
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| Product | HI0933-like protein |
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| Protein accession | YP_612036 |
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| Protein GI | 99079882 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2081] Predicted flavoproteins |
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| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.32138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACT GGGATGCGGT CGTGATTGGA GGCGGTCCGG CTGGATTGAT GGCAGCAGGG
GAGGTCGCGC GTCAGGGCCA TCGGGTGCTC TTGGTGGAAG CCAAGCCGTC GCCTGCGCGC
AAGTTTCTGA TGGCCGGAAA ATCCGGTCTA AACCTGACCA AAGACGAACC CTTCGAGGAT
TTGCTGGCGC AGTATGGCGA CTCGGCTGAG TGGCTGGCAC CGATGATCAA GGCGTTTGAC
GCTGCGGCTG TGCAAGACTG GGCGCGCGGG CTCGGGCAGG AGCTTTTTAC CGGGTCGACG
GGACGGGTGT TTCCCACGGT CATGAAGGGC TCTCCCTTGT TGCGGGCGTG GCTTCAGGAT
CTGGACACAC ATCGCGTTAC CCGGCAACTC GGCTGGCGCT GGACAGGTTG GCAGCAGGAC
GGGCAGCTGT TGTTCGGTAC GGCTGCAGGG CCACAAATCG TGACATCCCG CGCCACCATA
CTGGCGCTTG GTGGTGCGAG CTGGGCACGG CTTGGTTCGG ATGGCGCCTG GGCGGCCCTA
TTGGCGTCGC GCGGCGTCGC CTTGGCACCG TTTCAACCGT CGAACGCTGC CCTTTCGGTC
GCCTGGAGTG ATCACATGAC GCCGCATTTT GGCGCAGCAC TCAAGGCAGT GGCCTGGCAG
GCAGGCGCAT TGCAGGCCCG TGGCGAGGCG ACCTTGTCGC AACGCGGGCT CGAAGGCGGT
GGGCTTTACA CGTTGACCCC AGCTCTGCGC GAAGGGCAGC CGCTTTTTGT CGACTTGTCG
CCGGACCTCA ACGAGGGCGA TCTTGCCCGG CGGCTCGCGA AACCGCGTGG TAAGACGAGC
TGGTCGAACC ACATGCGCCG CACGCTCAAG CTTGCGACGG TGAAAATGGC ACTATTGCAA
GAGTTTGGCC GCCCGCTGCC GCAGGATCCA GAGAGCCTGG CCCGTCTCAT CAAACATTTG
CCCGTGCGCC ATACGGGGTT ACGCCCAATG GACGAGGCAA TCTCGACGGC TGGCGGTGTG
CGCCGCGATG CCTTGGATGA CGGCCTCATG CTAAAGGCGA TCCCCGGCAC GTTTTGCGCC
GGAGAGATGC TTGATTGGGA TGCGCCAACG GGAGGGTATC TCTTGACTGC CTGCTTTGCG
ACCGGCCGTT GGGCAGGGCA AGCGGCGGCG CGCTACTTGG CGAGTTCCGC CACGCGCTGA
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| Protein sequence | MQDWDAVVIG GGPAGLMAAG EVARQGHRVL LVEAKPSPAR KFLMAGKSGL NLTKDEPFED
LLAQYGDSAE WLAPMIKAFD AAAVQDWARG LGQELFTGST GRVFPTVMKG SPLLRAWLQD
LDTHRVTRQL GWRWTGWQQD GQLLFGTAAG PQIVTSRATI LALGGASWAR LGSDGAWAAL
LASRGVALAP FQPSNAALSV AWSDHMTPHF GAALKAVAWQ AGALQARGEA TLSQRGLEGG
GLYTLTPALR EGQPLFVDLS PDLNEGDLAR RLAKPRGKTS WSNHMRRTLK LATVKMALLQ
EFGRPLPQDP ESLARLIKHL PVRHTGLRPM DEAISTAGGV RRDALDDGLM LKAIPGTFCA
GEMLDWDAPT GGYLLTACFA TGRWAGQAAA RYLASSATR
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