| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0036 |
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| Symbol | |
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| ID | 4076303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 37516 |
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| End bp | 38433 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005323 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_612031 |
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| Protein GI | 99079877 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0186771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.317689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCC AGACCATGAC ACTTCGAGAG TGGCTCTTGA CGGATACGCC AACGTCGCGC
CGTCAGGCCA GGCTGGCCGC CTATTACAAA GGCTGGCTAA CCTTACGGTC CAACCATATG
GCGATGGGGG GGCTGGCAAT CATCGTTCTG CTCGTCGCCG TTGCGATCTT TGCACCGCTT
CTTGCGCCTC ATGATCCCTA CTATCAGGAT CTTGGCAATC GGCTTCAGCC CCTGGGCACC
GAAGGGCACA TCCTCGGCAC CGACTCGCTG GGGCGGGACA TCCTGAGCCG CCTCATCTGG
GGCGCACGGA TCACGCTCTA CATCGTCGCA CTTGTTGCCA TGATCGCGCC CATCGTCGGG
TTGTTGGTCG GAACGGTCTC CGGCTACGTG GGCGGCTGGG TCGACATCAT GCTGATGCGG
GTGACGGATA TTTTCCTTGC GTTCCCACGC CTTGTGCTGG CGCTGGCCTT TGTGGCGGCG
CTGGGAGCCG GGATTGAGAA CGCAGTGCTG GCGATTTCAC TCACGGCCTG GCCCCCCTAC
GCGCGTCTGG CACGGGCCGA GACGCTCACC ATCCGTTCGT CGGATTTCAT CAGCGCGATC
CGTCTGCAAG GGGCGGGGCC GCTCCTGATC ATCACCAAAC ATATCTGGCC GCTCTGTATC
AGTTCGCTGA TCGTGCGGGT GACACTGGAT ATGGCGGGGA TCATTCTGGC GGCTGCGGGA
CTTGGCTTTC TGGGCCTTGG CGCGCAACCT CCAAGCCCGG AATGGGGCGC GATGATCTCC
GAGGGGCGCC GGTTCATTCT GGACTACTGG TGGGTCGCCA CCATGCCCGG TCTTGCCATC
TTTGCCGTTT CGCTGGCCTT CAACCTTCTG GGCGATGGTT TGCGCGATGT GCTTGATCCG
AAGGATAGCA GCTCATGA
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| Protein sequence | MSSQTMTLRE WLLTDTPTSR RQARLAAYYK GWLTLRSNHM AMGGLAIIVL LVAVAIFAPL
LAPHDPYYQD LGNRLQPLGT EGHILGTDSL GRDILSRLIW GARITLYIVA LVAMIAPIVG
LLVGTVSGYV GGWVDIMLMR VTDIFLAFPR LVLALAFVAA LGAGIENAVL AISLTAWPPY
ARLARAETLT IRSSDFISAI RLQGAGPLLI ITKHIWPLCI SSLIVRVTLD MAGIILAAAG
LGFLGLGAQP PSPEWGAMIS EGRRFILDYW WVATMPGLAI FAVSLAFNLL GDGLRDVLDP
KDSSS
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