| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0032 |
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| Symbol | |
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| ID | 4076299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 32737 |
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| End bp | 34287 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005319 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_612027 |
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| Protein GI | 99079873 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00522964 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.253327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGGT TCTTAAAAAC ACTGGCTTTG ATTGGCCTTA CGCTTGCGGC ATTTGTGATG
CTCGCACGGC TTCTTTTTCC TTTGCCCGAC ATTTCCAATC GCGAGATCAG CTCGGCCCTT
CCGGCGAGCG ATCAGACTTC GATCGGGGCG ACAGTTGCAG ATCTGAACGC GGCGCATGTC
GGCCAGTCAG GGATCATCCC GCTGCGCAGC GGGACGGATG CGCTTGCAAG CCGGGTCGAA
CTGATCCGTC GCGCCGAAGC CTCGATCGAC GCGCAATACT ACATTTGGCA CGACGACACC
TCCGGGGTTC TCCTGCTAGA GGAATTGCGC AACGCGGCGC TGCGGGGCGT GCGGGTCCGA
CTTCTGCTGG ACGATAACGG CGTGCCTGGG CTTGACGCAA CAATGGCTAC GCTCAACGCG
CAACCCAATT TCGAAATCCG ACTGTTCAAC CCCTCAACGA TCCGGCGCCC AAAGCTCTTG
GGCTACAGCT TTGATTTCTT TCGGATGAAC CGGAGAATGC ACAACAAGTC CCTTATCGTG
GACGGGGCGG TCGCGATCAT TGGCGGGCGC AACATTGGTG ACGAGTATTT CGACGTGCAG
CGGGATGCAT TTTATATCGA CATGGATGCG CTGGCTGCGG GCAAAGTGGT GCCGGAAACG
GCCACCGTCT TTGATGACTA CTGGAACAGC GCCTCCGTTT TTGCGCTCGA GACGATTGTA
TCATCCGATG GGAACCTGAT TACCTTTGAT CAACGCGTAT CAGAGGTGAT GGCCACACCA
GAGGCTCAAC GCCTGATGGG CGATCTGCAA AGCAGTGCAG ATAAATTCGC GCGTGGTGAG
ATGCCGATGG AGTGGACAAA TGTTCGCGTG GTGGCCGATG ACCCTGTGAA AGGTCAGGGC
AGCGCGACAT CAGACCAGTT GATGATCTCT CGTCTGGGCG AGATCCTCGG CCAGGTCGAG
ACCCGCTTGG ATCTAGTTTC GGCCTATTTT GTACCCGGGC AGCGAGGAAC GGAGTACCTC
ACGGATTTGG CGGCTGCTGG CGTGGATGTG CGTGTGTTGA CCAATGCGAT GAACACCACG
GATGTCTTGA TGGTGCATTC TGGCTACACG CGGTACCGTC GCGCGCTGCT GGAAGCAGAT
GTTTCGCTCT ACGAGTTGAA ACTGCGCGCT CAGATGTCGG CTGACGCCAA CCGGCAACTC
AAACCCTTTG GTCTTTCGGG GGCGAGCCTG CACGCCAAGA CCTTTGCCGT CGACGGTGAT
CGCGTTTTTA TCGGCTCTTT CAACTTTGAT CCGCGCTCGG CCACCCTAAA TTGCGAGATG
GGGTTTCTCA TCGAAAGTCC GACGCTCGCC GGGCAGGTCA GCGCAGGCTT TGACGGCCCA
CTCCTGACGG TGTCCTATCA ACCGGCGCTG ACACCCAAAG GCAAGATGAT ATGGCGCGAG
CCAATCGAAG ATGGCGAGAC ATTGATCTAC CAAGAAGAGC CCGGCGCCAC CTGGTTCCAG
CAGATTGCAA TCGCGGTGAT TGGCGTGCTG CCGGTTGAAT GGCTTTTGTG A
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| Protein sequence | MMRFLKTLAL IGLTLAAFVM LARLLFPLPD ISNREISSAL PASDQTSIGA TVADLNAAHV
GQSGIIPLRS GTDALASRVE LIRRAEASID AQYYIWHDDT SGVLLLEELR NAALRGVRVR
LLLDDNGVPG LDATMATLNA QPNFEIRLFN PSTIRRPKLL GYSFDFFRMN RRMHNKSLIV
DGAVAIIGGR NIGDEYFDVQ RDAFYIDMDA LAAGKVVPET ATVFDDYWNS ASVFALETIV
SSDGNLITFD QRVSEVMATP EAQRLMGDLQ SSADKFARGE MPMEWTNVRV VADDPVKGQG
SATSDQLMIS RLGEILGQVE TRLDLVSAYF VPGQRGTEYL TDLAAAGVDV RVLTNAMNTT
DVLMVHSGYT RYRRALLEAD VSLYELKLRA QMSADANRQL KPFGLSGASL HAKTFAVDGD
RVFIGSFNFD PRSATLNCEM GFLIESPTLA GQVSAGFDGP LLTVSYQPAL TPKGKMIWRE
PIEDGETLIY QEEPGATWFQ QIAIAVIGVL PVEWLL
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