| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0028 |
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| Symbol | |
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| ID | 4076295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 27635 |
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| End bp | 29086 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005315 |
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| Product | xylulokinase |
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| Protein accession | YP_612023 |
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| Protein GI | 99079869 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.237536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.287388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTGG GTCTTGACGT GGGGACGTCG GGGCTGCGCG CATTGCTGGC CGATGAGGGC
GGCAATGTCA TTGGCGTGGC AGATGCGGCG TACGGAGTCT CTCATCCGAA AACCGGGTGG
AGCGAACAGG ACCCGCAGGA CTGGATAACT GCGTGCCAGA GCGCGGTTGC AGAGCTGAGA
GGCGAGCATC CAGAAGCCAT ATCCGCCTTG CGTGGCATCG GCCTCAGCGG CCATATGCAT
GGCGCGACTC TTCTGGACGT GGATGGCAAG GTTCTGCGCC CCTGTATCTT GTGGAACGAT
ACGCGCTCTG CAACAGAGGC TGCTGAACTC GATGGCACTG AGGGCGTGCG GGATCTGTCA
GGCAACATCG TCTTTCCGGG TTTTACCGCG CCAAAGCTGG CTTGGGTCAA AACTCACGAG
CCAGACATCT ACGCGCAAAT CGCCAAGGTT CTCTTGCCAA AGGATTATCT GCGCTTCTGG
CTTACTGGTT CCTATATTTC GGACATGTCC GATAGTGCGG GGACATCCTG GCTCGATGTG
GGGGCGCGCG ACTGGTCGCC GACACTGCTT GAGGCTTCAG GCATGCGCCG CGATCAGATG
CCTGATCTGG TCGAAGGCTC GGCAGCCGGC GGGGAGCTGC GCGCGGATCT TCGGGCCGAT
TGGGGCATCA AGGGCTCTGT GGTCGTGGCA GGTGGCGGTG GAGATAACGC CGTTGCGGCC
TGTGGCGCGG GCTGTTTTCG CGAGGGGGAG GGGTTTGTGA GCCTTGGCAC TTCCGGCGTG
CTCTTGGCAG CCAAGTCGGC CTATAAACCC GACCCAGCAT CTGCTGTTCA TACCTTCTGT
CATGCGGTGC CTCAGACCTG GTATCAGATG GGGGTGATCC TCGCGGCGAC CGATTGTCTA
AACTGGCTGT CACGCACTTT GGGTCAGACC CCCGCGACCC TCGCGGGGCG CTTGCCAAAT
GAGGTCAAAG GACCGTCCAG CATTACTTTT TTGCCGTATC TGTCCGGCGA ACGCACGCCG
CATAATGATG CGCAGATCCG CGCCACACTG GCGGGGCTGG ATATAGGCGA CGGCCCGGCA
GAGCTTACAC AGGCAGTGAT GGAGGGCGTG GCATTTGCCC TACGCGATTG CCTAGAGGCG
CTCAAGGGCA CCGACACGTC GTTCACCCGA CTGCTGGCAG TCGGTGGCGG CACCCGTTCA
CCCTACTGGG TCGAGACCCT TGCAACCGTG CTTGGGGTAT CGCTCGACAT CCCCGACAAA
GGCGAATTTG GTGCCGCATT GGGCGCGGCA CGTCTGGCTA TGACAGCGAC CGGCGCCGAT
CTGGCGACCG TTATGCGCGC GCCGCCCATC TCTCACACTA TTGATCCGCG CAGTGATCTC
ATCGAGGCCT ATGATACGTC ATATGCCCGG TATCGCGCGC TTTATCCTAA CATGAAGGCA
CTCATGACAT GA
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| Protein sequence | MFLGLDVGTS GLRALLADEG GNVIGVADAA YGVSHPKTGW SEQDPQDWIT ACQSAVAELR
GEHPEAISAL RGIGLSGHMH GATLLDVDGK VLRPCILWND TRSATEAAEL DGTEGVRDLS
GNIVFPGFTA PKLAWVKTHE PDIYAQIAKV LLPKDYLRFW LTGSYISDMS DSAGTSWLDV
GARDWSPTLL EASGMRRDQM PDLVEGSAAG GELRADLRAD WGIKGSVVVA GGGGDNAVAA
CGAGCFREGE GFVSLGTSGV LLAAKSAYKP DPASAVHTFC HAVPQTWYQM GVILAATDCL
NWLSRTLGQT PATLAGRLPN EVKGPSSITF LPYLSGERTP HNDAQIRATL AGLDIGDGPA
ELTQAVMEGV AFALRDCLEA LKGTDTSFTR LLAVGGGTRS PYWVETLATV LGVSLDIPDK
GEFGAALGAA RLAMTATGAD LATVMRAPPI SHTIDPRSDL IEAYDTSYAR YRALYPNMKA
LMT
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