| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0027 |
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| Symbol | |
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| ID | 4076294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 26757 |
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| End bp | 27371 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005314 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_612022 |
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| Protein GI | 99079868 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.189554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.37885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCACGC ATCTTTACCA ACACGATTTG CCAAATTCCC TCGATCTCGG ACCTGTGGTG
GCAATTGACT GCGAAACCAT GGGGCTCAAC CCTCATCGCG ATCGTCTCTG CGTTGTGCAG
ATGTCGAGCG GTGACGGCGA CGCGCATCTT GTGCAGATCG CAAAGGGGCA AACCGACGCT
CCGAACCTGA CCGCGATGCT TACCAACCCG GATGTGCTCA AGCTGTTTCA CTACGGGCGC
TTTGACATCG CGGCACTATA CCATCGCTTT GGAGCGCTGG CGGCGCCGGT CTATTGCACC
AAGATCGCCA GCCGTCTGGT GCGCACCTAT ACGGATCGTC ACGGGTTGAA AAACCTGACC
CAAGACCTGC TCGGCCAAGA CATCTCCAAA CAGCAGCAAA TGAGCGACTG GGGCGCGGAA
ACACTCACGC GGGCGCAAAT GGATTATGCC GCCTCGGACG TTCTACATCT GCACCGATTG
CGCGACGCCC TTGATCAACG CCTTGTGCGC GAGGGGCGTA GCGACCTTGC CCAGGCCTGT
TTTGACTTTC TACCGACACG GGCGCGACTG GATTTGGCCG GCTGGCCAGA CACCGATATT
TTCGCCCATT CCTGA
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| Protein sequence | MATHLYQHDL PNSLDLGPVV AIDCETMGLN PHRDRLCVVQ MSSGDGDAHL VQIAKGQTDA
PNLTAMLTNP DVLKLFHYGR FDIAALYHRF GALAAPVYCT KIASRLVRTY TDRHGLKNLT
QDLLGQDISK QQQMSDWGAE TLTRAQMDYA ASDVLHLHRL RDALDQRLVR EGRSDLAQAC
FDFLPTRARL DLAGWPDTDI FAHS
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