| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0019 |
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| Symbol | |
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| ID | 4078682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 20200 |
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| End bp | 21900 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005306 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_612014 |
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| Protein GI | 99079860 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00457408 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG TTGGCGTGAT CATGTTGGTG CATACGGCCC TCGAGCGGGC CGAGCAGGTC
GTGCGCCACT GGACCGCCGC GGGCTGCCCA GTAGTGCTGC ATGTAGACCG GCAAGTGAGC
AAACAGGTGT TTCAGGAGTT CTGCGCGCGC CTGAAAGACG ACCCCCTGGT ACGCTTTTCG
CGCCGCCACA GATGTGAATG GGGGACCTGG GGCATTGTGG CCGCCTCTCA AAGCGCGTCT
GAATTGATGC TCTCCGAGTT CCCGGATGTG AGCCACATCT ATCTGACCTC CGGGTCCTGC
CTGCCGTTGC GCCCGGTGAA AGAGCTGCAA ACATACCTCG CGGCTCGGCC CGACATTGAT
TTCATCGAAA GCGCCACAAC CTCGGATGTC CCTTGGATCG TTGGGGGTCT CAGCACCGAG
CGCTTTACGA TGCGGTTTCC CTTTTCCTGG AAACGGCACC GCAAGCTGTT TGATCGCTAT
GTCCGGCTGC AACGGAAACT GAAGTTGCGA CGTCGGATCC CGGCCGGATT GGTCCCCCAC
ATGGGGAGCC AATGGTGGTG CCTTACTCGA CGCACTTTGA CGGCCATTCT CACGGATGCC
GACAGAGCGC GGTATGACGC GTATTTTCGT CACGTCTGGA TCCCGGACGA GAGCTACTAT
CAAACGCTTG CCCGGCTCCA TTCCGACAAT ATCGAGAGCC GGTCGCTGAC CCTTTCGAAG
TTCGACTATC AGGGCAAACC GCATGTGTTC TATGACGATC ACCTGCAACT CTTGCGGCGT
TCCGACTGTT TTGTCGCGCG CAAGATCTGG CCGCATGCAG AGCGGCTCTA TCAGGCCTTC
CTGTGCCCAT CGGCCACTGA CATCAACCGC ACAGAGCCCA ATCCGGGCAA GATCGACAGG
ATTTTTGCCA AAGCGGTGGA GCGGCGCATC CGAGGGCGCA AGGGGCTCTA CATGCAGAGC
CGCTTTCCCG CCAAAGGAGT CGAAAGCCAG CAGACCTGTG GGCCGTATTC GGTGTTTCAA
GGTTTTTCCG AATTGTTTGA GGATTTTGAA AGCTGGCTGG CGCGCGCAAC CGGTGCGCGC
GTGCATGGCC ATCTTTTTGC GCCTGAACGG GCCGAATTCG CGGGGGAGCA GAGGCTGTTC
AACGGCTGTC TGAGCGACAG TGCGCTCCTG CGCGATCGAA ACCCCCAGAG CTTTCTGTCG
AACCTGATCT GGAACACACG CGGCGAGCGG CAGTGTTTCC AATTCGGACC CCATGACACC
CAGAGCATCA ACTGGTTTAT CGCGCAGGAC AGCAATGCGC AGATCTCGGT GATCTCTGGG
GCATGGTCTG TGTCCCTGTT TAAGACTAAC CGAAGCTTTA GCGATCTTCG GCGCGAGGCG
GCAAAGCTGC AGCGCATTGA GGCTGAGCAT CTCAAGATCT TGCGAGGGCG CTGGACCCAT
GCCCGGATCC GGGTCTGGAG CATGGCGGAG TTTATCGAGG CGCCGATGGA AAACCTGCAA
ACCATCGTGG ATGAGATCGG TCCCATGTCC CGTAGCCATA TACTAGAAGC GCCGCAGATG
GTGGATCTCA CAGGGTTTGG CCAGTTCCTG CAAAATCTGA AAAATCAGGG GATGCACCCC
TATTTGATGG GGGATTTCCC CGCGCGCTCT GCGCCAAAGC AACCCATGCG CCAGGCGCGC
AAAACCTATA TCGTGAAGTA A
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| Protein sequence | MSNVGVIMLV HTALERAEQV VRHWTAAGCP VVLHVDRQVS KQVFQEFCAR LKDDPLVRFS
RRHRCEWGTW GIVAASQSAS ELMLSEFPDV SHIYLTSGSC LPLRPVKELQ TYLAARPDID
FIESATTSDV PWIVGGLSTE RFTMRFPFSW KRHRKLFDRY VRLQRKLKLR RRIPAGLVPH
MGSQWWCLTR RTLTAILTDA DRARYDAYFR HVWIPDESYY QTLARLHSDN IESRSLTLSK
FDYQGKPHVF YDDHLQLLRR SDCFVARKIW PHAERLYQAF LCPSATDINR TEPNPGKIDR
IFAKAVERRI RGRKGLYMQS RFPAKGVESQ QTCGPYSVFQ GFSELFEDFE SWLARATGAR
VHGHLFAPER AEFAGEQRLF NGCLSDSALL RDRNPQSFLS NLIWNTRGER QCFQFGPHDT
QSINWFIAQD SNAQISVISG AWSVSLFKTN RSFSDLRREA AKLQRIEAEH LKILRGRWTH
ARIRVWSMAE FIEAPMENLQ TIVDEIGPMS RSHILEAPQM VDLTGFGQFL QNLKNQGMHP
YLMGDFPARS APKQPMRQAR KTYIVK
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