| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0017 |
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| Symbol | |
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| ID | 4078680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 18017 |
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| End bp | 19078 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005304 |
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| Product | hypothetical protein |
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| Protein accession | YP_612012 |
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| Protein GI | 99079858 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.129406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.670386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGA TCTCGCTGAT GGCCGCCTAC CGGTTGCGCC TGAAGCGGCG GCGGTGTCTG
TGGCGGGCCT ATCGGGCAAG GCGACAGCTT CGGTGCATCG TCGACAACAC CATCAACATA
GGGCGCGATG ATATTCTCGT GGTGGTGGTG CTGCGCAATG AAGCGCAGCG CCTACCATAT
TTTCTGGAGT ATTATCGTCG GCTTGGCGCA GCGCATTTTC TGGTGGTGGA TAACACGAGC
GAAGATGGCA GCCTTGCCCT GCTGCAACGC GAAGCCCGGC GTGGCGATCT CTCGCTTTGG
CAAACCCACG ACAGCTATCG CGCGAGCCGC TTTGGGATTG ATTGGTCGGG CTGGTTGCTG
ATGCAACACG GCAGTGGTCA TTGGTGCCTG ACGGTCGATG CCGACGAGCT GCTCGTCTAT
CCCGGCATGG ATCAGATGGA CTTGCCAATG CTCACGCAAA GACTGGATCA GATCGGGCTG
GAGGGATTTG GCGCGCTGAT GCTTGACCTC TACCCAAAGG GGCCGCTCGG CACGCAAGAG
TATCGCGTTG GGCAAGACCC GACAGAGGTG CTCCGGTGGT TTGATGCGTC ACCCTATCAC
GCTGTGCGGC AGGCCCCGCA GGGCAACCTT TGGCTTCAAG GTGGCGCGCG GGCGCGCATG
TTCTTTGCTG ACACCCCAGA GCGGGCTCCG ACGCTCAACA AGATCCCGCT CATGCGATGG
CATTGGCGCT ACGCTTACAC GAATGCGACG CATGCGCTTT TGCCGCCTCG GCTCAACGCG
ATTTATGGTG GGACCGAAGG ACAGGCACCT TCGGGCGTGC TCCTTCACAC CAAGTTCCTG
CCAGAAATCG TAAGCAAGTC GAAACAGGAG CGCAGCCGCG CAGAGCATTT CCACAACCCG
ACCCTCTTTG AGGGGTATTA CGCACAGATT GAAACCAAGC CTGATTTCTG GCATCCAGAT
TCACAAGAGT ATCACAGCCC CGAACAGTTG GCCGAGCTCG GGCTTTGTCG GGGATTTGAC
GCGCGTACCA CCGTTGCGGG TGGACAACGT AACCAGTTCT AA
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| Protein sequence | MPKISLMAAY RLRLKRRRCL WRAYRARRQL RCIVDNTINI GRDDILVVVV LRNEAQRLPY
FLEYYRRLGA AHFLVVDNTS EDGSLALLQR EARRGDLSLW QTHDSYRASR FGIDWSGWLL
MQHGSGHWCL TVDADELLVY PGMDQMDLPM LTQRLDQIGL EGFGALMLDL YPKGPLGTQE
YRVGQDPTEV LRWFDASPYH AVRQAPQGNL WLQGGARARM FFADTPERAP TLNKIPLMRW
HWRYAYTNAT HALLPPRLNA IYGGTEGQAP SGVLLHTKFL PEIVSKSKQE RSRAEHFHNP
TLFEGYYAQI ETKPDFWHPD SQEYHSPEQL AELGLCRGFD ARTTVAGGQR NQF
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