| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0013 |
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| Symbol | |
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| ID | 4078676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 14274 |
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| End bp | 15071 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005300 |
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| Product | 3'(2'),5'-bisphosphate nucleotidase |
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| Protein accession | YP_612008 |
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| Protein GI | 99079854 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
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| TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0129118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.641907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATTATG ATGATCTGGT AGTGGTGATG CGGCGCTTGG CTCTGGAAGC GGGTGACAAG
ATCATGGAGA TCTACAACTC CGATGATTTC GACGTGAAGC AGAAATCAGA CGATAGCCCT
GTTACCGTTG CGGACGAGGC GGCAGACGCA TTGATCTCGG CGGGGCTGCG CTCGGCTTTT
CCTGACGTGA TGCTCGTCAC CGAAGAGCAA GCCGAGTCTC ATAGCGCAAC AGGCGATACA
TTCCTGATTG TTGACCCTCT GGACGGCACC AAGGAATTCA TCAATCGCCG TGGCGACTTC
ACCGTCAATA TCGCCTATGT CGAGGCAGGC GTGCCCACGC GCGGTGTGGT CTACGCGCCC
GCCAGAGACC GTATGTTCTA CACTCTTGCC GATGGATCAG CGGTCGAGGA AAAAGGCCCC
TTCAGCAAGA ATGAAGTGGG CGAGACCACG GCGCTCAAAG TGGCTGAGAG CGACAATAGC
GCTCTGCTTG TGGTCGCGTC GAAATCCCAC CGCGATCAGG CCACAGACGA TTACATCAAC
AAATACAGCG TGAAAGACAC TCGCAGCGCA GGGTCTTCGT TGAAATTCTG CCTTGTTGCG
ACGGGCGAGG CCGATCTTTA TCCGCGCGTT GGCCGCACGA TGGAGTGGGA TACGGCGGCA
GGGCATGCTG TTCTTTCGGG CGCTGGTGGC CGCGTTGTGC GTTTTGATGA TCACAACCCG
CTGCGGTACG GCAAGGACGG ATTTGCGAAC CCGTTCTTTA TCGCCCACGC GCCTGCGGTC
GAGTTGAAAG ACGCGTAA
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| Protein sequence | MNYDDLVVVM RRLALEAGDK IMEIYNSDDF DVKQKSDDSP VTVADEAADA LISAGLRSAF
PDVMLVTEEQ AESHSATGDT FLIVDPLDGT KEFINRRGDF TVNIAYVEAG VPTRGVVYAP
ARDRMFYTLA DGSAVEEKGP FSKNEVGETT ALKVAESDNS ALLVVASKSH RDQATDDYIN
KYSVKDTRSA GSSLKFCLVA TGEADLYPRV GRTMEWDTAA GHAVLSGAGG RVVRFDDHNP
LRYGKDGFAN PFFIAHAPAV ELKDA
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