| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0001 |
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| Symbol | dnaA |
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| ID | 4078745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 45 |
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| End bp | 1457 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005288 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_611996 |
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| Protein GI | 99079842 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0703594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.628106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACG ACACATGGGG TCTACTAAGA AAACGTTTGC TAAAAACGGT CGGGCAGAAC
AACTTCACCA CTTGGATCGA GCCGCTTGAG CTGGACCAGG TGGATGGCGG CGTGGCGACG
TTCCACGTGC CCACAAATTT CATGGGGAAT TATGTGAGCC AGAACTTTGC AGATCTGATC
CTGCATGAGT TCAACAAATC TGGCGAAGCT GTACAGCGAC TGGCGTTCAA GGTCGCGGCC
AATTCTCCGA CCCGCCCGGT GCAACCAACG ATGTCCGAAG CGATCGAGGA ACCTGCCCCG
CTTCAGACAA CCGTTGTGGA TCAACTGGGC AATCAAGAAG GGAATACGTC TGTGAAATCG
CCGCCAGAAG ACCTTCAGGC AGCGCCGCTT GACCCCCGTT TCACATTCGA CAGTTTTGTG
GTCGGCAAAC CCAACGAGCT GGCACACGCG GCCGCGCGCC GTGTGGCCGA AGGTGGCCCG
GTGACGTTCA ATCCGTTGGT CCTTTATGGC GGCGTGGGTC TTGGTAAGAC ACACCTGATG
CATGCGATCG CGTGGGAGTT GAAAGAGCGC AATCCCGAGC TGAACGTCCT GTATCTTTCC
GCCGAACAGT TCATGTATCG GTTTGTTCAG GCGCTGCGCG AGCGCAAGAT GATGGATTTC
AAACATCTCT TCCGCTCTGT TGATGTGCTG ATGGTGGATG ACGTGCAGTT CATCGCCGGC
AAGGATTCTA CCCAAGAGGA GTTCTTCCAT ACCTTCAATG CGCTGGTGGA CCAGAACAAG
CAGATCATCA TCTCAGCCGA TCGCGCACCC GGCGAGATCA AGGATCTCGA GGATCGCGTA
AAGTCGCGCC TGCAATGTGG TCTGGTGGTG GATCTGCATC CAACCGACTA CGAATTGCGT
CTGGGCATCC TTCAGACCAA GGTGCAGCAG AACCGCAAGA ACTACCCGGA TCTGAAAATC
GCAGATGGTG TTCTGGAGCT GCTTGCGCAC CGGATCTCGA CCAATGTGCG CGTGCTCGAA
GGCGCGTTGA CACGCCTGTT CGCCTTCGCT TCCCTTGTGG GACGCGAGAT CGACATGGAC
CTTACGCAGG ATTGTCTTGC GGATGTGCTG CGCGCCTCCG AGCGCAAGAT CACCGTCGAG
GAAATCCAGC GCAAGGTGTC GGAGTATTAC AACATCCGGA TGTCGGATAT CATCGGCCCC
AAGCGCCTGC GGTCTTATGC GCGCCCGCGT CAGGTGGCGA TGTATCTGTG CAAACAGCTG
ACCAGCCGCT CGCTACCGGA AATCGGGCGC CGTTTTGGTG GTCGGGATCA TACCACCGTT
ATGCATGGTG TGCGTCGCAT CGAAGAGTTG AAGACCATCG ACGGCCAGAT CGCCGAGGAT
GTGGAGATGC TGCGCCGCTC GCTCGAGGCG TAA
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| Protein sequence | MTDDTWGLLR KRLLKTVGQN NFTTWIEPLE LDQVDGGVAT FHVPTNFMGN YVSQNFADLI
LHEFNKSGEA VQRLAFKVAA NSPTRPVQPT MSEAIEEPAP LQTTVVDQLG NQEGNTSVKS
PPEDLQAAPL DPRFTFDSFV VGKPNELAHA AARRVAEGGP VTFNPLVLYG GVGLGKTHLM
HAIAWELKER NPELNVLYLS AEQFMYRFVQ ALRERKMMDF KHLFRSVDVL MVDDVQFIAG
KDSTQEEFFH TFNALVDQNK QIIISADRAP GEIKDLEDRV KSRLQCGLVV DLHPTDYELR
LGILQTKVQQ NRKNYPDLKI ADGVLELLAH RISTNVRVLE GALTRLFAFA SLVGREIDMD
LTQDCLADVL RASERKITVE EIQRKVSEYY NIRMSDIIGP KRLRSYARPR QVAMYLCKQL
TSRSLPEIGR RFGGRDHTTV MHGVRRIEEL KTIDGQIAED VEMLRRSLEA
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