| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3742 |
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| Symbol | |
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| ID | 4075449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 799434 |
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| End bp | 800444 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005262 |
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| Product | farnesyltranstransferase |
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| Protein accession | YP_611971 |
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| Protein GI | 99078713 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.326793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGG TGATGACAAA GACTCCGCAG GGAAAGCCTC ATGAATTGCT GGCCGAGACA
CTGGCTCCGG AACTGGAGGC GGTAAACCTT CTCATTCGCG AGCGTATGGC GTCTCAGCAT
GCGCCACGAA TTCCCGAGGT CACGGCCCAT CTGGTCGAGG CGGGCGGCAA ACGTCTGCGC
CCGATGCTGA CCTTGGCTGC GGCGCGGATG TGTGGCTATG AGGGCGAACA TCATCTGAAG
CTCGCCGCTA CGGTGGAGTT CATCCATACG GCGACACTCC TGCATGACGA TGTGGTCGAC
GAGAGCGCGC AGCGCCGGGG TCGGCCCACG GCGAATCTTT TGTGGGACAA CAAGAGTTCG
GTTCTGGTGG GCGACTATCT CTTTGCTCGC AGCTTCCAGC TCATGGTCGA TACCGGGTCA
CTCCGCGTGC TGGATATTCT CGCCAATGCC TCGGCCACGA TTGCCGAGGG CGAAGTCCTT
CAGATGACCG CGGCAACGGA TCTGGGCACC ACGGAAGAAA TCTACCTACA GGTTGTGCGT
GGCAAGACCG CGGCGCTGTT TTCGGCAGCG ACAGAGGTCG GTGGCGTGAT TGCCGGGGCC
AGCGAGGCGC AGGTCAAGGC ACTGTTTGAT TATGGCGACG CGCTAGGTAT CGCCTTCCAG
ATCGCGGATG ATTTGCTGGA CTATCAAGGC GATACAGCCA AGACCGGTAA AAACGTCGGT
GACGATTTCC GCGAGCGCAA GCTGACCCTG CCGGTCATCA AGGCGATTGC GCAGGCCGGC
GACGAAGAGC GCGCCTTTTG GCACCGCACA ATCGCCAAAG GCCGCCAGGA AGAGGGCGAT
CTTGAGCATG CTCTGTCGCT GATGGCGAAA TACGCCACAC TGGAGGCAAC CCGCGCCGAT
GCGATCGGCT GGGCGGACAA GGCGAAATCT GCACTGGCGG ACCTGCCCGA ACATCCGATC
CGCACACTGC TGATTGACCT CGCCGATTAC GTTGTATCCC GTCTGAACTG A
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| Protein sequence | MNQVMTKTPQ GKPHELLAET LAPELEAVNL LIRERMASQH APRIPEVTAH LVEAGGKRLR
PMLTLAAARM CGYEGEHHLK LAATVEFIHT ATLLHDDVVD ESAQRRGRPT ANLLWDNKSS
VLVGDYLFAR SFQLMVDTGS LRVLDILANA SATIAEGEVL QMTAATDLGT TEEIYLQVVR
GKTAALFSAA TEVGGVIAGA SEAQVKALFD YGDALGIAFQ IADDLLDYQG DTAKTGKNVG
DDFRERKLTL PVIKAIAQAG DEERAFWHRT IAKGRQEEGD LEHALSLMAK YATLEATRAD
AIGWADKAKS ALADLPEHPI RTLLIDLADY VVSRLN
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