Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3648 |
Symbol | |
ID | 4075076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 702946 |
End bp | 704712 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638005168 |
Product | sulfate permease |
Protein accession | YP_611877 |
Protein GI | 99078619 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGCT TTCGCCAATA TTTCCCCATC CTCGTATGGG GCCGGGACTA CGACAAATCC GCCCTGTCGA ATGATCTCAT AGCGGCGGTG ATCGTAACGA TCATGTTGAT CCCGCAGTCG TTGGCCTATG CCCTTTTGGC GGGATTGCCG CCCGAAGCGG GGATCTATGC CTCCATCGCG CCTATCCTGC TCTATGCGGT TTTTGGCACC AGCCGGGCGC TTGCGGTTGG TCCGGTTGCG GTGGTGTCGC TGTTGACAGC ATCTGCTGTG GGGCAAGTGG CCGAACAGGG CACGGCGGGG TATGTCGTCG CGACCCTCAC GCTGGCCTTC TTGTCGGGGA GCTTTCTGGT TCTGATGGGG GTGCTCAAAC TTGGCTTCAT TGCCAATTTT CTGAGCCACC CGGTCATAGC GGGTTTTATC ACCGCATCGG GTATTCTAAT CGCGACAAGC CAGATCAAAC ATATCCTCGG CATTCGTGCC GAAGGTCATA CCTTGCCGGA GATGCTCTAT TCGATCGCGC TGCGTCTGGG CGAGGTAAAC TGGATCACCT TGTTGATCGG AGCCAGCGCG ACAGGCTTTC TATTCTGGGC TCGCAAACAC CTGAAGCAGA CACTGCATGG CATGGGGACG CCGCCGCTCT TGGCGGATAT TCTGAACAAG GCGGGGCCAG TGGCGGCCGT CGTCACCACG ACTGTGGTTG TCTGGGGATT TGACCTTGCT GAGAAGGGCG TCAAAATCGT GGGTGAAGTA CCCCAAGGCT TACCACCGCT CACGATGCCG GGCTTTGCTC CCGATCTGAT CGGAGCGCTT CTGGTGCCCG CGATCCTGAT TTCCATCATC GGTTTTGTTG AGTCTGTTTC CGTGGCGCAA ACTCTTGCCG CCAAGCGACG CCAGCGCATT GACCCGGATC AGGAGTTGAT CGGCCTCGGC GCGGCCAATT TAGGGGCCGC CTTTACCGGT GGCTACCCGG TGACAGGCGG CTTTGCACGG TCGGTTGTGA ACTTTGACGC TGGCGCCGAG ACGCCGGCTG CTGGGGCCTT CACGGCCATC GGGTTGGCCC TTGCCGCCGT GGCCCTCACC CCGTTGGTTT ATTACCTGCC GATCGCGACA CTAGCGGCGA CCATCATCGT GGCTGTGCTG AGCCTCGTCG ACCTGTCGAT CCTCAAAAAA ACCTGGACCT ATTCGCATGC CGACTTCATC GCTGTTGCGG CCACCATTCT TTTGACCCTG GGACTCGGTG TCGAAATCGG TGTCGCTTCC GGCGTCATCC TCTCTGTGGT CTTGCACCTC TACAAGACCT CTCGCCCCCA TGTGGCGGAG GTTGGGCTGG TGCCCGGCAC CCAGCATTTT CGCAACATCG ATCGTCACAA CGTCCAAACG GACCCCCGTT TGGTGTCGCT GCGCGTCGAT GAAAGTCTCT ACTTCGTCAA CGCCCGATTT CTCGAGGACC TGATCCAGAA ACGCGTCACC GAAGGCTGCG CGATCAAACA TGTGGTGCTT ATGTTTTCGG CGGTGAACAT GGTGGACTAT TCTGCGCTCG AGAGCCTCGA AGCCATCAAT CACCGCCTAA AGGACATGGG CGTTGGTCTC CACCTTTCCG AGGTCAAAGG GCCCGTGATG GATCGCCTTC AAAGATCTGA TTTCATTGAC GAAATGAACG GAAAGATCTT CCTTTCTCAA TATGAGGCCT GGGCCAATCT GACCGCGGGG GCGCAACAGG GCGCTGCGGA CACAGGGCAG GGCGACCAGC TGCGCTGCGG CGCATGA
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Protein sequence | MPSFRQYFPI LVWGRDYDKS ALSNDLIAAV IVTIMLIPQS LAYALLAGLP PEAGIYASIA PILLYAVFGT SRALAVGPVA VVSLLTASAV GQVAEQGTAG YVVATLTLAF LSGSFLVLMG VLKLGFIANF LSHPVIAGFI TASGILIATS QIKHILGIRA EGHTLPEMLY SIALRLGEVN WITLLIGASA TGFLFWARKH LKQTLHGMGT PPLLADILNK AGPVAAVVTT TVVVWGFDLA EKGVKIVGEV PQGLPPLTMP GFAPDLIGAL LVPAILISII GFVESVSVAQ TLAAKRRQRI DPDQELIGLG AANLGAAFTG GYPVTGGFAR SVVNFDAGAE TPAAGAFTAI GLALAAVALT PLVYYLPIAT LAATIIVAVL SLVDLSILKK TWTYSHADFI AVAATILLTL GLGVEIGVAS GVILSVVLHL YKTSRPHVAE VGLVPGTQHF RNIDRHNVQT DPRLVSLRVD ESLYFVNARF LEDLIQKRVT EGCAIKHVVL MFSAVNMVDY SALESLEAIN HRLKDMGVGL HLSEVKGPVM DRLQRSDFID EMNGKIFLSQ YEAWANLTAG AQQGAADTGQ GDQLRCGA
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