| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3643 |
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| Symbol | |
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| ID | 4075071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 700125 |
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| End bp | 700790 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005163 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_611872 |
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| Protein GI | 99078614 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.621489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGATCG CAGATTGGAC CGCGCATTTT CAGGGCACCC GGGCCTTGCC CGATGCCACC
CGTACCCGCC TCGAACAGGT GAGCCATGCG CAGACCTACA AGAAAGGGCA GGAAGTCTTT
GGTCCGGCCA ACCTGCCGGA CAGTCTGCTG TTTCTGCTCA AAGGGACCAT CAGGGTCTCG
CAAAGCTCGG ACAATGGCCG CGACATCGTG CTCTACCGTG TGGATGCGGG TGAAAGCTGT
GTCCTTACAA CCGCCTGCAT GCTCGCTGAG GAGGCCTATA ACGCCGAGGG CATTGCCGAA
ACCGATGTGA CCGTCATTCA GCTCCCGAAG TCTACTTTTG ACCAATTGGT GGCCGAGGAA
CCCGCATTTC GCTCCTTTGT GTTTGCAGCC TATTCACGCC GACTCATTGA TCTGCTGCGG
GTGGTGGATG ATGTGGCCTT TGGGCGCATT GATGTGCGCC TTGCCGACCG ACTCCTGACA
CTCGCGGGCG CAGATAGTGA AATCGCGGCG ACGCACCAGC AGATTGCCAG CGAATTGGGA
ACCGCGCGCG AGGTAATCTC GCGGGTGCTG CACGACTTTC AAAAGCGGGA AATGATCAGC
CAATCTCGAG GGCGCATCAC CATATTGAAC CGCGTCGCAT TGCGCGCCAT GGCCGAGAGC
GTCTGA
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| Protein sequence | MQIADWTAHF QGTRALPDAT RTRLEQVSHA QTYKKGQEVF GPANLPDSLL FLLKGTIRVS
QSSDNGRDIV LYRVDAGESC VLTTACMLAE EAYNAEGIAE TDVTVIQLPK STFDQLVAEE
PAFRSFVFAA YSRRLIDLLR VVDDVAFGRI DVRLADRLLT LAGADSEIAA THQQIASELG
TAREVISRVL HDFQKREMIS QSRGRITILN RVALRAMAES V
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