| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3640 |
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| Symbol | |
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| ID | 4075068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 697562 |
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| End bp | 698059 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005160 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_611869 |
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| Protein GI | 99078611 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.6832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.687836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGGG TTGCCGATGC TTTGGATGGC ATCAATCGCG GGCTTGCGCA TGTGATCCGC
TGGTTGGCGC TGCTGATGGT TCTGGTTCAA TTCGCCATCG TCGTGGGGCG ATATGTCTTT
GGTGTGAACT CTATCGCGGC ACAGGAGAGC GTGCTCTATA TGCACTCTGC GCTTTTTATG
CTGGCGGCGG GTTACACGCT GCTCGTGGAC CAACATGTGC GTGTGGACGT GTTTTTCGCA
GGCCTGAGCC CGGCCGGGCA ACGCCGCGTC GATGTCTTTG GGCACCTGTT CCTGCTGATG
CCGTCCATGA CCGCCCTTCT CTATTGGTCC TGGCCGTCGG TGCGCAATTC CTGGTCGATC
CTTGAAGGAC CGCTCGCAGT AGGCGGCATC GAAGCGGTTT TTCTGCTGAA ATCCCTGATC
CCCGCGTTTT GCGTGCTGGT CATGCTTCAA TCGCTCTCCC TACTGATCCG CCTGCTCTTT
GAAAGTGATC GCCGATGA
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| Protein sequence | MIRVADALDG INRGLAHVIR WLALLMVLVQ FAIVVGRYVF GVNSIAAQES VLYMHSALFM
LAAGYTLLVD QHVRVDVFFA GLSPAGQRRV DVFGHLFLLM PSMTALLYWS WPSVRNSWSI
LEGPLAVGGI EAVFLLKSLI PAFCVLVMLQ SLSLLIRLLF ESDRR
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