| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3636 |
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| Symbol | |
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| ID | 4075064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 693110 |
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| End bp | 694219 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005156 |
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| Product | ABC transporter related |
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| Protein accession | YP_611865 |
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| Protein GI | 99078607 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.529666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACAGACT CTCACCCCGA TTTGGAATGC CGCGATCTGG TAAAAGACTT CAGCGATTTC
AGAGCTGTAG ACCGTGTCAG CTTTGAGGTG CCGCAGGGCT CCTTTTTTTC CATTCTAGGC
CCCTCGGGCT GCGGAAAAAC AACGCTGCTG CGGATGATCT CGGGATTTCA ATCCCCGAGC
AGCGGCGATC TGCGGATCAA GGGCAAGTCC ATGATCGGCG TGGCGCCGAA CAAGCGCCCC
GTGTCGATGG TGTTTCAACA TCTGGCGCTG TTTCCCACCA TGAACATTGG TGACAACGTC
GGGTTTGGTC TGCGTCAACG TGGCGTCGGC AAGGCGGAAA TCAAGACGCG TGTGGAGCAA
GTTCTGGAGC GCGTAGGCCT TCCGGGGGTG TCTGCGCGTC GTGTCGATCA GCTCTCTGGC
GGCCAGAAGC AGCGCGTGGC CATCGCCCGT TGCATGGTGC TAGAGCCAGA CGTCCTGTTG
CTGGACGAAC CTCTCGGGGC GCTCGATCTC AAGCTTCGGG AACATATGAA GGTGGAGCTG
AAGGCGCTGC AGGCCGAGTT CAACACGACC TTTGTCTACA TCACTCACGA CCAATCCGAG
GCTCTGGTGA TGAGCGACAA CATCGCCGTG ATGAACAAGG GGCGCTTTGA GCAAATCGGT
GCTCCTCATG AGGTCTATCA CCATCCCTCG ACCGCCTTTG TGGCCGGATT TGTGGGGGAC
GCGAACAAAT TTGATGCCAA GCTCAAATCC AAAAATGGAG CGATGCTGAC CTTTGAGACC
CCGACCGGTG CGCAGATGCG GGTTGAGGCT GCAAACTCTG ATCTGAGCGA AGGCCAGCGC
GCGCAGATCT TCCTGCGTCC GGAGGCAATC GCGCTTTCAC CCACCACAAA CGAAGGCGAC
GATGCCGCGA ATGTCAGCCC CGGTGTCGTC GAGACGGTAC TCTTCAACGG CGCTAACAGC
ACGGTGAGCG TGCGCGGTGC GGCGGGTGAG CTTCTGAAAG TCGCGTTGCC GCAGACTGGC
GATTTTGCCA CCCTGCAAAA AGGGGACAAG CTGTTCACCC GCTGGCGCCC AATGGATGCG
CGTTGTTTTG CTGCGGTGGA GGCGGGATGA
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| Protein sequence | MTDSHPDLEC RDLVKDFSDF RAVDRVSFEV PQGSFFSILG PSGCGKTTLL RMISGFQSPS
SGDLRIKGKS MIGVAPNKRP VSMVFQHLAL FPTMNIGDNV GFGLRQRGVG KAEIKTRVEQ
VLERVGLPGV SARRVDQLSG GQKQRVAIAR CMVLEPDVLL LDEPLGALDL KLREHMKVEL
KALQAEFNTT FVYITHDQSE ALVMSDNIAV MNKGRFEQIG APHEVYHHPS TAFVAGFVGD
ANKFDAKLKS KNGAMLTFET PTGAQMRVEA ANSDLSEGQR AQIFLRPEAI ALSPTTNEGD
DAANVSPGVV ETVLFNGANS TVSVRGAAGE LLKVALPQTG DFATLQKGDK LFTRWRPMDA
RCFAAVEAG
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