| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3630 |
|---|
| Symbol | |
|---|
| ID | 4075057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | + |
|---|
| Start bp | 687919 |
|---|
| End bp | 688836 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 638005149 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_611859 |
|---|
| Protein GI | 99078601 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0975997 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAGCG AACAGGACAA CACATCTTTC GAGTGGTTGG AAGCCGAGCT GCAGGACACG
CTGGACGAGG ACTTCGAAAT CGAATTCGCC GAGCCCATGC TGTCCATGGA GCTTCGCAAG
ATCTATCGCG CCCAGCATCC TGAAATGCTT GATCGCAAAG TCTATTTCCG TAACCTGCTG
CGTCTGCAGG CAGAGCTGAT CAAGGTGCAG GATTGGGTGC AGCATACCGG CGCCAAAGTC
TGCATCCTTT TTGAGGGACG CGACAGTGCT GGCAAGGGTG GTGTGATCAA ACGCATCACC
CAGCGGCTCA ATCCGCGAGT TGCGCGTGTG GTGGCCTTGC CAGCGCCGAG CCGCCGTGAG
CAGAGCCAAT GGTATTTTCA GCGCTATGTC CCGCATCTGC CGGCTGCGGG CGAGATCGTG
CTTTTTGACC GTTCCTGGTA CAATCGCGCC GGTGTCGAGC GCGTGATGGG CTTTGCCACA
GACGATCAGG TTGAACAGTT TTTTCAAGAC GTTCCGGAAT TTGAACGCAT GCTTGTGCGC
TCTGGTATCA TCTTGCTGAA ATACTGGTTC TCGATCACCG ATGAGGAACA GCAATTGCGA
TTCCTGATGC GCATTCATGA CCCGATGAAG CAGTGGAAGC TTTCGCCCAT GGATCTGGAG
AGCCGCATTC GCTGGGAGCA GTACACCAAG GCCAAAGAGG ATATGTTTTT TCGCACCAAT
ATCGACGAGG CACCTTGGTA TATCGTCGAA GGCAACGACA AAAAGCGCGA ACGCCTGAAC
TGCATCGAGC ACCTTCTGAC CAAAATTCCC TATCACGATG TCCCGAGTGA AAAGGTCAAT
CTGCCGGATC GAGAGTATAA TCCGAGCTAT GAGCGCAGGG TCCTGCCGGA CGAACTTTAC
GTGCCAAAGA TCTACTGA
|
|---|
| Protein sequence | MSSEQDNTSF EWLEAELQDT LDEDFEIEFA EPMLSMELRK IYRAQHPEML DRKVYFRNLL
RLQAELIKVQ DWVQHTGAKV CILFEGRDSA GKGGVIKRIT QRLNPRVARV VALPAPSRRE
QSQWYFQRYV PHLPAAGEIV LFDRSWYNRA GVERVMGFAT DDQVEQFFQD VPEFERMLVR
SGIILLKYWF SITDEEQQLR FLMRIHDPMK QWKLSPMDLE SRIRWEQYTK AKEDMFFRTN
IDEAPWYIVE GNDKKRERLN CIEHLLTKIP YHDVPSEKVN LPDREYNPSY ERRVLPDELY
VPKIY
|
|---|
| |