| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3610 |
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| Symbol | |
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| ID | 4075037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 660766 |
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| End bp | 664488 |
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| Gene Length | 3723 bp |
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| Protein Length | 1240 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005129 |
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| Product | PEP-utilising enzyme, mobile region |
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| Protein accession | YP_611839 |
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| Protein GI | 99078581 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.66232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.099174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGATTG TAGCTTTGGG TTTTGCAAAT CACTGGCAGT GGCAAAGCCA CAAGACAGAA
GAGCAGCTGC GCCTGCAAGC CACCTTGACC CGGCCCGCTC AGTTTGCGGG CACCGAGATC
AAGGACGAAG AGCTGAAAGA GACCAGCTAT AGCGCGCAAG AAACCCACGC GCAGGGCATC
ACCACCGAGG AGGCTTCCGC GCTGCTGTCC AATGGGGACG TCAAATTCTT TGATATTCGC
GAGACCGCAG AGAACGCCAT GGGCACTTTG CCCGGCGCGG ACCACATCCG CTTCCCGGAC
TTTCGCGAAA ATCCACCCTT GGCGCCGGGC GATACAGTTG TCCTGTTTTG TCACAATGGC
AATAGAAGCT CTGAGACCTG CACGGAGCTC GCGAAGCTCG GCATCGACTG TCGCTTCATC
ACTGGCGGTA TCGAAAAATG GATCGTCGAG GGGCGCGATT TCTCCGACAG TCGCGTTCAG
AGCCTCTCTG ATCTGCGCGC AATCCCCGAA TACCCGAACA AGTCTCGCCT GATAAATACC
GAGACATTCA AATCCTACAT GGCGGGCGAG CACGTCCAGA TTGTCGACAC CCGTTATCCC
GGCGATTTTG AAACTGGGCA CCTGCCCGGT GCAATCAATA TCCCACTGCG GGCGCTCACG
AGTGAGGAAC TCGCGCGACG GATTTCCCGC CTGCGCAAGG TTCCGACGGT TGCGGCCTGT
TATGATCGGC GCAGTTGTTT CATGGGTCAG GTGCTGGGTC TGGAACTGAC ACAGGCGGGG
ATCCCATTTG AGGGCCGATA TACTGTTCCC TGGGAGTACT TCATTGCGCC GCCGCCCAAA
CCGCATGTGG TGGAGTGGCT GGCCGAACAG GAAAGTGGTC TTTGGGACAA GGCCATCGCC
GGCCTCAGTG CTGCTCTGCT GTGGGGGCAC GCCAAGTCTC ATCTGCTGCT GAGCCTGTTG
GCACTGGCGG CGATCTCGCG AGTTCTCGTG CTGCCCATCG CACTCAAATC CGAGAGCGAT
CAGATCACCC TGCGTCGCCA CAAGGCGGAT CTGGAGGCGC TAAAAACGCG ACTCGCCCAT
GACCCGATGC GCAAGGCGCG CGCGATCCGC GCGTTTTATG CACAACATGG ATTAACCCCC
ATGCGCAATA TGGCGGCCTT GTTGTTCCTG CCGTTGATGA TGCTGGGGTT GCAAGCCGCC
GAGCGGGCCG CAGCAGAGGT TGCGGGCGGT TTCTTGTGGA TCGCGGATCT GGGCGCTCCC
GATCCCATGT GGATCGCGCC AGTGCTGACC TGCGGGCTTG CGGGCGCGTA TCTCGTGCTT
GCAATTGCGA AATCTCGTCG CGCGGCATTC CTATGGCTGG TCCTCGGCCT CCCGGCCCTG
TTTCTGTTGA CGATGGGGCT GTCAGCAGCT GGAAACCTCT ATCTCGCCAT GAGCCTTACA
GGGCTGTTGG TGCAGTATCT CTATGTCTCT GGCGCGTTTG CCCGAAAAAT ACAGTTGCGC
AAGCGACTAC CCGATGGTGT CCATGCGCTT GCTCAGACTG AGGCCCTCTC GACGGCGGGC
AACAAGGCGC TGCGCTTGTC GCAGATGTCG CGGGCGGGAT TCCCGGTGCC CAAAGCCGTT
GTCCTGACCG ACCGCTTCCT TAACCAGTTC AAAGATGCGG ATGACCCCAA GCAACAGCAA
ATGGCCGCGT CTATCTGGCG CAATGTCGGC CCAAGGCCCT GCGCGGTCCG TTCGTCTGCC
AGCAATGAAG ACGGCGCGGA CCAGAGCTTT GCGGGGGTTT TTGACTCTGT TTTGGACGTC
AATAAGGAGA CGCTTTGCGC AGCGATCCGC TCCGTTCTGG CTTCCTTTGC CTCGGAGCGC
GCGGACAGCT ATGGCAGCGC CGAGGCGGGC CATGCCAACA TTCTCGTGCA GGAAATGGTC
AACGCCACCT TTGCAGGGGT TCTGTTCACC CAGGATATGC AGGCCCCCGG AATGATGCTC
TTGGAGTGGG TCGAGGGATG CGGCGAAGAT CTGGTTTCCG GTCGCAAGAC TCCTGGCACA
GCGCGCTTTG GCCGAGTGAG CGGTCTAGCG GCGCAAGACA CATACGCCCC GCCGTTTGAC
CCGGCAAACC TTTTGCAGAT GGGACGCGCC ATCGAGGCGC TATTTGAGAG GCCGCAGGAC
ATCGAATGGG CTTGGTCCGA GGGTCAGTTC TACATCCTAC AATCTCGAGA CATCACAACC
GTGGCGATCG GCAGTGCCTC TGAACAGGCC GCGGCCGAAG AGTGGCGCAG GCTCTTTGCC
GCGCGATCAC ACACTGAGGA TTCCGATGCG ATCATCCTTG AGCAGGACGA AATGAGCGAG
GTTCTTCCGC GCCCAACGCC CCTGTCTTTT TCCTTGATGA GCAACCTTTG GGCCCCCGGG
GGCAGTCTTG ATCTCGCCAG CCGGGCATTG GGCTTGCCCT ACAACCTTCC CGAGGGCGAG
GATGCGCATT TGGTGCGCCT CTTTGGTAAA ACCTATGTCG ACACTGCGTT GAAAAAAGAG
CTCTCGATGG ATCTGCGCGG GAATCGAGCG AACCGCATGC GCAAGCAACT GACACCGACA
CTTGAAGGGT TCGAACGCGA GGTGCTTCCG GCTCTTCTGG ATCGCATCGA GGACTGGCAG
GCGCTGCGTT TTGAGGCCCT CCCTCGGCAC AAGCTGTTGA AAACAATATC GGTCCTGCGC
GACTACTTTG TCACGGAGAT CTATGTCGAG GCGGAGAAGA TCAACTTGCT CGCCGCGTTT
GCCATGCAAG AGGCCAATGC CGCTGCACAA GGCGATCCTG CCCTGCGCAG CCATTTGATG
CAGGCTGAAT TGAAGTATTC GCCAGCCAGC CTCCTGGCGC AATGCACAGG CACCGAAGAG
GAAGCACAGG CCCGCGCGCT TGAATTGATG GGACACCGGG CGATGTTTGA CTACGAATTG
TCGACACCGC GCTATTACGA GGCGCCCGGG CTTTTGTTTA CGTTGCTTGA TCCCTCTCAT
CACGGGTTGG AACCCGCTGA ACTGCCCTCT GGCGTGCCAG AAACGCTGAG GCAAACCCTA
GAAATCGCAA TCGCCTTCCA GGACCTCAAG GAACGGGCCA AGCATGAATC CCTGCGCGTC
CTGAGTGAGC TGCGGCGCGC GCTCTGTGCA TTGGGGGAGG ACACCGGTCT GGGGTCACTG
ATCTTCTATC TGACGCTGGA CGAAATCCTC ACGGCCGATT GGACGCAGGT AGACATGCTC
AGAGCGCAAG CAGAACAGCG CAAACATCAT GATACGCTCT GCCGGGATCT TGCACCAAAC
GCGGTTCAAC TGAGTTTGCG GGACTGTGAG CAGCTCTCAT CCGGGGGCGT CAAGACGCTC
GACGAGGGCA CGCTTGGCGG TATTTGCGTT GCAGGTTCCG GTCGCGCCAC TGGTCGCGTG
TACAGGATTG CCGATGAAAC CGCCTATGGG CCCGAGGCCT TTGAAGGGTT CGAGCCCGGC
GACATCATCG TCTGTCGCAT GGTAAACCCC GCGTGGCTGC CACAAGTTCA GCAGGCCGGC
GCGGTGATCA GTGTTGTCGG TGGCTGGCTC AGTCACATGG CAATCGTTGC CCGTGAAAAG
CAGATCCTGA TGCTCGTTGG CGCACAGGGC CTCGAGGCGC TCTCTCATGG CGATGTCATC
ACGGTCACGG ATCGCGGTGA AATCGAACCT GAATCCGATA GCAGCGAGGC GTTGAGGGCC
TGA
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| Protein sequence | MLIVALGFAN HWQWQSHKTE EQLRLQATLT RPAQFAGTEI KDEELKETSY SAQETHAQGI
TTEEASALLS NGDVKFFDIR ETAENAMGTL PGADHIRFPD FRENPPLAPG DTVVLFCHNG
NRSSETCTEL AKLGIDCRFI TGGIEKWIVE GRDFSDSRVQ SLSDLRAIPE YPNKSRLINT
ETFKSYMAGE HVQIVDTRYP GDFETGHLPG AINIPLRALT SEELARRISR LRKVPTVAAC
YDRRSCFMGQ VLGLELTQAG IPFEGRYTVP WEYFIAPPPK PHVVEWLAEQ ESGLWDKAIA
GLSAALLWGH AKSHLLLSLL ALAAISRVLV LPIALKSESD QITLRRHKAD LEALKTRLAH
DPMRKARAIR AFYAQHGLTP MRNMAALLFL PLMMLGLQAA ERAAAEVAGG FLWIADLGAP
DPMWIAPVLT CGLAGAYLVL AIAKSRRAAF LWLVLGLPAL FLLTMGLSAA GNLYLAMSLT
GLLVQYLYVS GAFARKIQLR KRLPDGVHAL AQTEALSTAG NKALRLSQMS RAGFPVPKAV
VLTDRFLNQF KDADDPKQQQ MAASIWRNVG PRPCAVRSSA SNEDGADQSF AGVFDSVLDV
NKETLCAAIR SVLASFASER ADSYGSAEAG HANILVQEMV NATFAGVLFT QDMQAPGMML
LEWVEGCGED LVSGRKTPGT ARFGRVSGLA AQDTYAPPFD PANLLQMGRA IEALFERPQD
IEWAWSEGQF YILQSRDITT VAIGSASEQA AAEEWRRLFA ARSHTEDSDA IILEQDEMSE
VLPRPTPLSF SLMSNLWAPG GSLDLASRAL GLPYNLPEGE DAHLVRLFGK TYVDTALKKE
LSMDLRGNRA NRMRKQLTPT LEGFEREVLP ALLDRIEDWQ ALRFEALPRH KLLKTISVLR
DYFVTEIYVE AEKINLLAAF AMQEANAAAQ GDPALRSHLM QAELKYSPAS LLAQCTGTEE
EAQARALELM GHRAMFDYEL STPRYYEAPG LLFTLLDPSH HGLEPAELPS GVPETLRQTL
EIAIAFQDLK ERAKHESLRV LSELRRALCA LGEDTGLGSL IFYLTLDEIL TADWTQVDML
RAQAEQRKHH DTLCRDLAPN AVQLSLRDCE QLSSGGVKTL DEGTLGGICV AGSGRATGRV
YRIADETAYG PEAFEGFEPG DIIVCRMVNP AWLPQVQQAG AVISVVGGWL SHMAIVAREK
QILMLVGAQG LEALSHGDVI TVTDRGEIEP ESDSSEALRA
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