| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3592 |
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| Symbol | |
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| ID | 4075519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 640718 |
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| End bp | 641839 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005111 |
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| Product | DNA polymerase III subunit delta' |
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| Protein accession | YP_611821 |
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| Protein GI | 99078563 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0470] ATPase involved in DNA replication |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.57935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG TTGATGACCT TCCCCGTGCC GATCAGGCCG AAGGCGCCCC CCATCCGCGG
GAAACGGCGC ATCTCTTTGG ACATGCGGAG GCCGAAGCGG AGTTCCTTAG CGCTTTCTCG
TCAGAGCGTC TGCATCATGC CTGGCTGATT ATGGGTCCGC GCGGAGTGGG CAAGGCGACC
TTGGCCTGGC GCATCGCACG CTTCCTGCTG GCAACGCCTC CGGTGGAGGA TGACGGTCTC
TTTGGGGCAC CTCCGCCGCC ACAGAGCCTT GATGTTGCTC CCGATCATCC AGTGAGCCAT
CGCATTCTGG CCCTGGCAGA GCCAGGATTG GCGGCAATTA CCCGCAGCTA CAACGATAAG
GGCCGTTTGC GCGATCAGAT CGTGGTCGAT GACATTCGTG TTCTGAACCG GTTCTTTGGC
CTGTCTTCTG CAGAGGGCGG TCGCCGTGTC GTGATTGTCG ACAGCGCTGA CGAAATGAAC
GTTAACGCGG CCAATGCATT GCTCAAGATG CTTGAGGAGC CGCCCGCCCG CACCACGCTC
TTGTTGATTT CGCATCAGCC TTCGCGCTTG CTGCCTACGA TCCGGTCACG GTGCCGGACG
TTGCGTCTTG GGCCCTTGGC GCCAGATGAC ATGCAGACTG CGCTTGAACA GGCTGGAGCC
GCACTTCCCG ATGATCCGAC CTATCTTGCG GCGCTTGCGG CCGGGTCGGT GGGGGCTGCA
ATGAGGCTGC TGTCACTGGA CGGAATGAAG CTCTATGGTG AGCTACTTGC GATCGTTGAC
AGCCTGCCGC GCCTTGATCG CCAGAGGGCT ATGGCGCTCG CGGAAAAAGC AGCCGCGCGT
GGTGGCGCAG AACGGTTTGA GCTCATGCTG ACCCTTCTGG ATGTGCTGCT CGTTCGGTTG
GCCCGAACCG GGGCCACGGG GCTTGCGCCA ACACCGGAAG CGGCCCCAAA CGAAGGTGCG
ATCCTGACCC GGTTGTCGCC AAACCCGCAG CGGGCGCGCG CCTGGGCCGA TCTTGCAGCG
ACAGTGACAG AGCGCACACG CCACGGTCAG GCCGTGAACC TTGACCCTGC GGCGCTCGTC
CTAGATACGG TGTTCAAGAT GCAGGACACC GCGTCGCGCT GA
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| Protein sequence | MSEVDDLPRA DQAEGAPHPR ETAHLFGHAE AEAEFLSAFS SERLHHAWLI MGPRGVGKAT
LAWRIARFLL ATPPVEDDGL FGAPPPPQSL DVAPDHPVSH RILALAEPGL AAITRSYNDK
GRLRDQIVVD DIRVLNRFFG LSSAEGGRRV VIVDSADEMN VNAANALLKM LEEPPARTTL
LLISHQPSRL LPTIRSRCRT LRLGPLAPDD MQTALEQAGA ALPDDPTYLA ALAAGSVGAA
MRLLSLDGMK LYGELLAIVD SLPRLDRQRA MALAEKAAAR GGAERFELML TLLDVLLVRL
ARTGATGLAP TPEAAPNEGA ILTRLSPNPQ RARAWADLAA TVTERTRHGQ AVNLDPAALV
LDTVFKMQDT ASR
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