| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3580 |
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| Symbol | |
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| ID | 4075508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 629292 |
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| End bp | 630824 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638005100 |
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| Product | hypothetical protein |
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| Protein accession | YP_611811 |
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| Protein GI | 99078553 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4938] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00103089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.191716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGTCG GAAGAAATAG CGCTGGCAAA AGCACTTTTT TAAGATCCCT TCCGCTGATT
CGACAGTCGT TAGAGACAAG GAGTAGTGCA CCAATTCTAT GGTACGGCGA CTTCGTTGAC
TTTGGAGATT TTCAAACTGC CGTATCTTCT GAGGCCAAAG ACGGCTATGC TGTGTTCTCA
TTTAAAGTAA GAGACTTAGA AAAACGTCAT CGATCGACAG TCAGCCATCA TACCAATTAT
CTCCTGAGAT ATCGCACACA AACAGTTAAA ATCGATGAAG CCATAGTAAA ATACTACGTT
GGTGCAGAAT CTGGAAAAAC CGCACTAAAA AAAATATCCC TTGAGATCCC GAGCGAAGAC
CTAATTTGTG ATATTTCATA TCGGGGAAGG TTGGGCACCA GCGGATCACT TACTGTTAAC
GGAGAAGAGC TGCCTTACAT ATTGCAAAAT TTTGAAATTG TAAACTCCTC CAATGACCTA
TTCAGCGCGC CATCCCTAAT TTCAAAAACC AAGGACGCAA ACTCTAACGT ACGAAGAAGA
CATTCTTATC AAGATATAGC AGTAAAGGAG CTAGAGAGGT TTCTAAGGCG CGAGATACCT
AGAATATCAA GCTCGGACAC CTTTAGAAAT GAAGTCGCAA ATATACTTTC TGGAACACCC
CATTTGGAAG AAAAATGGAA ACGCTTATCC GAAACCGCCA ACACAGCTTC GTTTCGAAAA
TACTACGAAA ATATTCAAAA GGGAACATCT GGAAAATCCA AAGATAGCAT CCTTACGATT
CAACGCACCT TCCGTGCTCT TCAGGTTCTA GATGTGATAA ATGATGACTT ACAGTACTTT
TTCTCTGGCG TCAGTTATTT AGGACCAGCA AGAGCGGCAG GGGAACGATT CTATCGGAAA
CAAGAGCTGG AGGTTTCCGA AATACTTCCA AATGGCTCGA ATTTCCCAAT GTTTCTTGAT
TCACTATCGA CTGGTCAAAA GAGGAGCTTT TCAGATTGGG TCGAGAGTAT TTTTGGTTAC
GGCGTTGAGC TCAAATCACA TGAGGGACAC ATTAGCATCC ATCTAAAAGC AGGCGAAAAG
TCAGTCAACG TTACCGATAC TGGTTATGGA GTATCACAGA TCTTGCCTGT TCTGGCGACG
GTCTGGTGGT CAAGTAGGCG AACCACGGAA CGCTGGGGTA TACCTTATGG GCGGCGACAA
GCGATAAGAA CTATAGCTAT CGAACAACCA GAGCTACACC TGCACCCGGC ACATCAGGCG
AAGCTAGCGG ACGTTTTTGT GAAGGGTATT AAACTTGGGC AGTCTGAGAC CAATATTAAC
ATAGTAAATA TCCTAATTGA AACGCACAGT GAGGCACTCA TCAACAGACT GGGAGAACTA
ATCGAGCTGG GCAGCATATC CAGTGATGAC GTTCAAGTTA TTGTCTTCGC TGCAGAAGAC
GACATAAATT CACCTACCAG AATGTCTGTG GCCAACTTTG ACAGCAACGG GGCGTTGGAA
AATTGGCCCT TTGGATTCTT CAATTACTCT TGA
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| Protein sequence | MLVGRNSAGK STFLRSLPLI RQSLETRSSA PILWYGDFVD FGDFQTAVSS EAKDGYAVFS
FKVRDLEKRH RSTVSHHTNY LLRYRTQTVK IDEAIVKYYV GAESGKTALK KISLEIPSED
LICDISYRGR LGTSGSLTVN GEELPYILQN FEIVNSSNDL FSAPSLISKT KDANSNVRRR
HSYQDIAVKE LERFLRREIP RISSSDTFRN EVANILSGTP HLEEKWKRLS ETANTASFRK
YYENIQKGTS GKSKDSILTI QRTFRALQVL DVINDDLQYF FSGVSYLGPA RAAGERFYRK
QELEVSEILP NGSNFPMFLD SLSTGQKRSF SDWVESIFGY GVELKSHEGH ISIHLKAGEK
SVNVTDTGYG VSQILPVLAT VWWSSRRTTE RWGIPYGRRQ AIRTIAIEQP ELHLHPAHQA
KLADVFVKGI KLGQSETNIN IVNILIETHS EALINRLGEL IELGSISSDD VQVIVFAAED
DINSPTRMSV ANFDSNGALE NWPFGFFNYS
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