| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3530 |
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| Symbol | sdhB |
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| ID | 4075209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 564490 |
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| End bp | 565269 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005045 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_611764 |
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| Protein GI | 99078506 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAAT TCGCACTTCC GAAAAACTCC AGGATCACCA CTGGCAAGAC GTGGCCCAAG
CCTGAAGGCG CAACCAATGT GCGCAAGTTC CAGATCTACC GCTGGAACCC GGACGATGGC
AAAAACCCCA GCGTGGACAC GTATTTCCTC GATATGGACA AATGCGGTCC GATGGTTCTG
GACGCGCTCA TCAAGATCAA GAACGAGATC GACCCGACGC TGACCTTCCG CCGCTCCTGC
CGCGAGGGCA TCTGTGGCTC CTGTGCGATG AACATCGACG GGATCAACAC GCTGGCCTGT
ATCTATGGTC TCGACGAGAT CAAGGGCGAC GTGAAGATCT ATCCGCTGCC GCATATGCCG
GTGGTGAAGG ACCTTATTCC CGATCTCACG CATTTCTATG CCCAGCATGC CTCGATCATG
CCGTGGCTTG AGACCAAGAC CAACCGTCCC GCCAAAGAGT GGAAGCAGTC CATCGAGGAC
CGCAAGAAGC TTGACGGGCT TTATGAGTGC GTGATGTGCG CGTCCTGCTC CACCTCCTGC
CCGAGCTACT GGTGGAACGG CGACCGTTAC CTCGGCCCTG CCGCGCTGCT GCATGCCTAT
CGCTGGATCA TCGACAGCCG CGACGAGGCA ACCGGTGAGC GTCTCGACAA TCTTGAAGAC
CCGTTCAAGC TCTACCGCTG CCACACCATC ATGAACTGCG CCAAGACCTG CCCCAAAGGC
CTGAACCCCG CCAAGGCGAT CGCGCATATC AAGAAACTGA TGGTCGAACG CACCGTTTGA
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| Protein sequence | MVEFALPKNS RITTGKTWPK PEGATNVRKF QIYRWNPDDG KNPSVDTYFL DMDKCGPMVL
DALIKIKNEI DPTLTFRRSC REGICGSCAM NIDGINTLAC IYGLDEIKGD VKIYPLPHMP
VVKDLIPDLT HFYAQHASIM PWLETKTNRP AKEWKQSIED RKKLDGLYEC VMCASCSTSC
PSYWWNGDRY LGPAALLHAY RWIIDSRDEA TGERLDNLED PFKLYRCHTI MNCAKTCPKG
LNPAKAIAHI KKLMVERTV
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