| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3500 |
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| Symbol | |
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| ID | 4075179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 538189 |
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| End bp | 538938 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005015 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_611734 |
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| Protein GI | 99078476 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.565267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.760694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCTTG CTTTTCAATA TCTGCGCTCG CTGCTCTACA TGATCCAGAT CTATGTGGCG
ATGCTGGTGC TCGGGATCGC TTTTGCGCCC TATGCGCTAC TGTCCAAAAA CGGCGCGCGT
CAAGCCTGCA AGACCTATGC CCGCTGGGCG ATCTGGTCGG CGCGCTGGAT GGTGGGCATC
CGCTGCGAAG TGCGCGGCCC GGTTCCCCAG GGTGAGGTGC TCGTGGCCGC CAAGCATCAG
AGCTTTCTCG ATATTCTGGT GATCTTCAAT GCCCTGCCAC AGGCCAAGTT CATCATGAAA
CAAGAGCTGA TGTGGACCCC GATCATTGGC ATCTACGCCA AACGTCTGGG CTGTATTCCA
GTCAACCGCG GCAAGCGCGG CGCAGCGATT GCGCGTATGA TCAAGGACGT GGCGCGCGAG
TTTTCCGAAC CCGGCCAACT GGTGATCTAT CCGCAAGGCA CCCGTGTCGC GCCCGGAGCG
CAGAAACCCT ACAAGGTCGG CAGCGGCGTG CTCTATGAAG AGCTGAAACA GCCCTGCGTC
CCGGTTGCCA CCAACGTGGG CCTGTTGTGG CCCCGCACCG GCCTTTTGCG CAAACCCGGA
CTTGGGGTGG TCGAATTCCT CGACCCGATC GCACCGGGAC AGGCGCGCGA CAGTTTCATG
GCTGAGTTGG AGCAGCGTAT CGAGGCCCGG TCAGATGCAT TGATGGCAGA ATTGGGATTT
GAACAAGATG GACGCGATAG AATCCATTGA
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| Protein sequence | MTLAFQYLRS LLYMIQIYVA MLVLGIAFAP YALLSKNGAR QACKTYARWA IWSARWMVGI
RCEVRGPVPQ GEVLVAAKHQ SFLDILVIFN ALPQAKFIMK QELMWTPIIG IYAKRLGCIP
VNRGKRGAAI ARMIKDVARE FSEPGQLVIY PQGTRVAPGA QKPYKVGSGV LYEELKQPCV
PVATNVGLLW PRTGLLRKPG LGVVEFLDPI APGQARDSFM AELEQRIEAR SDALMAELGF
EQDGRDRIH
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