| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3473 |
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| Symbol | |
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| ID | 4075107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 497379 |
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| End bp | 498818 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004982 |
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| Product | uracil-xanthine permease |
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| Protein accession | YP_611707 |
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| Protein GI | 99078449 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2233] Xanthine/uracil permeases |
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| TIGRFAM ID | [TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.179383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATA CAACCATCGG GACGCCGGAG CAGCTCCGCG ACCCCGACTA TATGCCCCCT
CTGGGCAAAG CCATCCCGCT GGGCATCCAG CATGTGCTGG CGATGTTTGT CTCCAACGTG
ACCCCCGCAA TCATCGTGGC GGGGGCAGCC GGGTTTGGCT TTGGCTCAAA CTCCCCCGAC
TTTCCCGAGC TTTTGTACCT GATCCAGATG TCGATGCTCT TTGCCGGGAT CGCCACCCTG
ATGCAGACGC TGACGCTTGG TCCGGTCGGG GCCAAGCTGC CAATCGTGCA GGGGACCTCG
TTTGCCTTCC TGCCGATCAT GATTCCGCTG GTTGCGGGCA AGGGCGTGGA TGCGCTGGCG
GCGCTCTTTG GCGGCGTGCT CATCGGTGGG CTGTTCCACG CGGCCCTTGG TCTGGTGATT
GGCCGCATCC GCTTTGCGCT GCCGCCACTT GTCACCGGCC TTGTGGTCAC CATGATCGGT
CTGGCGCTGG TCAAAGTCGG CATCCAATAC GCCGCAGGCG GTGTGCCCGC CATCGGGACG
CCGGAATATG GCTCGCTTCT GAACTGGTCG GCGGCGCTTG TGGTGATCGT GGTCACGCTC
GGGCTCAAGT TTTTCACCCG TGGCATGCTC TCCGTGGCAG CTGTGCTCCT GGGGCTGATT
GTCGGCTATA TCTACGCACT CATGGTGGGG ATGCTCAGCT TTGACTCGAT TGGCGCCAGC
TGGAGCAATG CCGCCGCCTT TGCTCTTCCG CAGCCGTTCA AATACGGGTT TGAGTTCTCC
TTTGCCGCCA TTCTGGGCTT CTGCCTGATG GCCTTTGTAT CCGCGGTCGA AACCGTGGGC
GATGTTTCCG GCATCACCAA AGGCGGCGCA GGTCGCGAAG CCACGGACAA GGAAATCGAA
GGCGCAACCT TTGCCGACGG CTTTGGCTCG GCGCTGGCGG GGGCCTTCGG CGCGATGCCC
AACACCTCCT TCAGCCAGAA CGTCGGCCTC ATCGCCATGA CTGGCGTCAT GAGCCGGCAT
GTTGTCACCT GCGGCGCGAT CTTCCTGATC ATCTGTGGCC TCATTCCCAA GGTCGGCGCG
GTCATTCGCA CGGTCCCGAT CGAGGTGCTC GGTGGCGGTG TCATCGTGAT GTTTGGCATG
GTGGTCGCTG CGGGGATCTC GATCCTGTCG GATGTGGACT GGAACCGGCG CAACATGGTG
ATCTTTGCGA TTTCGCTCTC GGTAGGTCTT GGCCTGCAGC TGGAGCCCGG CGCGCTGCAG
CACATGCCCG ACACCGCGCG CATCCTGCTG ACCAGCGGCC TTCTGCCCGC CGCCGTGATC
TCTATCGCCT TGAACCTGAT CCTGCCCGAA GAGCTGGCGG ACGAGTCGAC CGAAGAGGTC
TCGGGCGGCA TGTCGGGCCA CTCCAAAGGA TCGCTTGGCA CGTCACGCGA CGCGCAATGA
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| Protein sequence | MSDTTIGTPE QLRDPDYMPP LGKAIPLGIQ HVLAMFVSNV TPAIIVAGAA GFGFGSNSPD
FPELLYLIQM SMLFAGIATL MQTLTLGPVG AKLPIVQGTS FAFLPIMIPL VAGKGVDALA
ALFGGVLIGG LFHAALGLVI GRIRFALPPL VTGLVVTMIG LALVKVGIQY AAGGVPAIGT
PEYGSLLNWS AALVVIVVTL GLKFFTRGML SVAAVLLGLI VGYIYALMVG MLSFDSIGAS
WSNAAAFALP QPFKYGFEFS FAAILGFCLM AFVSAVETVG DVSGITKGGA GREATDKEIE
GATFADGFGS ALAGAFGAMP NTSFSQNVGL IAMTGVMSRH VVTCGAIFLI ICGLIPKVGA
VIRTVPIEVL GGGVIVMFGM VVAAGISILS DVDWNRRNMV IFAISLSVGL GLQLEPGALQ
HMPDTARILL TSGLLPAAVI SIALNLILPE ELADESTEEV SGGMSGHSKG SLGTSRDAQ
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