| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3466 |
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| Symbol | |
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| ID | 4075100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 489983 |
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| End bp | 491395 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004975 |
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| Product | aromatic-L-amino-acid decarboxylase |
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| Protein accession | YP_611700 |
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| Protein GI | 99078442 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.811665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGGA CCGATTTTGC ATCCTGGGGC CGCAAGGTCG CCGATTGGGC GCAGGACTAT
CACCTCACCG TGGGCGAGCG CCCGGTGCGC GCGCAGACCA AACCCGGTGA TATGCTGACC
GCCCTGCCCG AAACACCGCC GGAACAGGGC GAGGGGATGG AGACGATCTT TGCCGATTTT
GAGGAAAAGG TGATGCCCGG CATCACCCAT TGGCAGCACC CGCGCTTCTT TGCCTATTTC
GCCTCCAACG CCGCCGCGCC CTCGGTGCTG GCGGAATTCC TGACCTCCGC CATCGCGCCG
CAATGTATGC TCTGGCAGAC CTCTCCGGCG GCGACCGAGA TGGAGACCCG GATGATGGAC
TGGCTGCGCC AATCCCTTGG CCTGCCGAGC GAATTTCGCG GCGTCATTCA GGACAGCGCC
TCTTCGGCGA CCCTTGCTGC GGTGCTCACC ATGCGCGAAC GGGCCTTGAA CTGGCAGGGC
AATCAACAGG GGCTCGCGGG CCAGCCGACC TTGCGGATCT ATTGTTCGTC CGAGGTGCAC
ACCTCGGTGG ACCGTGCGAT CTGGGTTGCG GGCATCGGTC AGGCCAACCT CGTGCGCGTA
CCCATCAAGG GCGACTGGCG CGGCATGGAT CCCGCAGCGC TTGAGACTGC GATCCAGTCG
GACAAGGCCG CAGGCCTTCA ACCCGCTGGC GTCATCCTCT GTGTGGGCGG CACCGGCACC
GGCGCCACGG ACCCCATCGC GGACTGCATC AAGGTGGCGC AGAATCATGG GCTTTATACC
CATGTGGACG CGGCATGGGC CGGTTCCGCG ATGATCTGCC CGGAGTTCCG CGCGTATTGG
CCGGGCATTG AGGGCGCAGA CAGCATCGTT TTCAATCCGC ATAAATGGCT CGGCGCGCAG
TTTGATTGCT CGGCGCATTT CCTTAAGAAC GCGGACGATC TGGTGCGCAC CCTCGCCATC
AGCCCGGAAT ACCTCAAGAC CCACGGTCAC GACGGCATCA TCAACTATTC CGAATGGTCG
GTCCCCCTGG GCCGCCGCTT CCGCGCGCTA AAGATCTGGT TCCTGATCCG CACCTATGGC
CTTGAAGGAT TGCGCCAACG CATCCGCAAT CACGTTGCAT GGTCGCGCCA GCTTCACGAC
GCGCTTGCGC AAGAGCCGGA TTTTGAAATC GTCACCCCGC CGATGTGGTC GCTCTGGACC
TTCCGCTACG CGCCTGATGG GGCCACGGAT CTCGATGCGC TGAACCTCGA ACTCGTGAAC
AGGATCAACG ACGACGGCCG CATCTACCTC ACCCAGACCC GCGTGGACGG CGTGCTGGTG
ATCCGGTTTC AGGCGGGCGC GTTTGAAACC ACCGAGGCTG ACATCATGCT CGCCCATGAT
GTGATCACAG AAATCGCAAG AGGACTGACC TGA
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| Protein sequence | MNWTDFASWG RKVADWAQDY HLTVGERPVR AQTKPGDMLT ALPETPPEQG EGMETIFADF
EEKVMPGITH WQHPRFFAYF ASNAAAPSVL AEFLTSAIAP QCMLWQTSPA ATEMETRMMD
WLRQSLGLPS EFRGVIQDSA SSATLAAVLT MRERALNWQG NQQGLAGQPT LRIYCSSEVH
TSVDRAIWVA GIGQANLVRV PIKGDWRGMD PAALETAIQS DKAAGLQPAG VILCVGGTGT
GATDPIADCI KVAQNHGLYT HVDAAWAGSA MICPEFRAYW PGIEGADSIV FNPHKWLGAQ
FDCSAHFLKN ADDLVRTLAI SPEYLKTHGH DGIINYSEWS VPLGRRFRAL KIWFLIRTYG
LEGLRQRIRN HVAWSRQLHD ALAQEPDFEI VTPPMWSLWT FRYAPDGATD LDALNLELVN
RINDDGRIYL TQTRVDGVLV IRFQAGAFET TEADIMLAHD VITEIARGLT
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