Gene TM1040_3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3448 
Symbol 
ID4075082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp472465 
End bp473310 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content61% 
IMG OID638004957 
Productcarboxylesterase 
Protein accessionYP_611682 
Protein GI99078424 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.775669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGT CACTGGAAAC CGTGTCCGAA AACCGCGCCT TTGGGGGCGT GCAGGGTGTC 
TACCGCCACA AAAGCAGCAG CACCAATTGC GAGATGACTT TTGGCCTGTT CCTCCCCGAG
GAGGCCAAGG ATGGCCCCGT GCCCGTGTTG TGGTATCTGT CGGGCCTGAC CTGCACACAT
GAAAACGCCA TGACAAAGGC CAGCGCGCAG GCCTGGTGTG CCGAGCAGGG GATCGCCATT
GTCTTTCCCG ACACCTCGCC GCGCGGCGAA GGCGTTGCCA ATGACGAGGC GTATGATCTG
GGACAGGGCG CTGGGTTTTA TGTGAACGCC ACCCAGGACC CCTGGAAGCC GCATTTCCAG
ATGTGGGACT ATGTGGCCGA AGAGCTGCCC GCGCTGCTTG GCGCCAATTT CAACCTCGAC
ATGTCCCGTC AGGCGATCAC CGGACACTCC ATGGGCGGGC ACGGCGCGCT GACGCTGGCG
ATGAACCTGC CGGGTCGGTT CCGGTCCGTT TCCGCCTTTG CGCCGATCTG CAACCCCACC
AACAGCGACT GGGGCCGCAA GCAGCTTTTG GCCTATCTGG GCGATGATGA GACCGCATGG
GCCAAGCATG ATGCCACGCT GTTGATGCGC GAAGCAGGGT TTGACGGCCC CGTCCTCATC
GACACCGGCA CCGCCGACCA GTTCGGGGAT CTCTTGAAAA CCGAAAGCAT GGCCGAAGCG
ATTGCCACCC GCCGTCAGGA GGCCACATTG CGAATGCAGA AGGGCTATGA CCATAGCTAC
TTCTTTGTCT CCACCTTCAT GGAGGAGCAT GTCTCCTTCC ACGCCGACGC CCTCTATCGG
GAGTAA
 
Protein sequence
MEPSLETVSE NRAFGGVQGV YRHKSSSTNC EMTFGLFLPE EAKDGPVPVL WYLSGLTCTH 
ENAMTKASAQ AWCAEQGIAI VFPDTSPRGE GVANDEAYDL GQGAGFYVNA TQDPWKPHFQ
MWDYVAEELP ALLGANFNLD MSRQAITGHS MGGHGALTLA MNLPGRFRSV SAFAPICNPT
NSDWGRKQLL AYLGDDETAW AKHDATLLMR EAGFDGPVLI DTGTADQFGD LLKTESMAEA
IATRRQEATL RMQKGYDHSY FFVSTFMEEH VSFHADALYR E