| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3447 |
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| Symbol | |
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| ID | 4075081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 470955 |
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| End bp | 472460 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004956 |
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| Product | soluble pyridine nucleotide transhydrogenase |
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| Protein accession | YP_611681 |
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| Protein GI | 99078423 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.587426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA CCACGCCCCA ATATGACTAT GACCTGATCG TCATCGGCTC CGGCCCCTCC
GGCCGCACCG CCGCCATTCA GGCCGCCAAG CTCAAGCGCC GCGTGCTGGT GATCGACCGC
AAGGATCGCC TGGGCGGGGT CTCTGTCCAT ACCGGCACGG TGCCCTCAAA GACCCTGCGG
GAAACCGTGC TGAACCTTAC CGGCTGGCGC GAGCGCAGTT TCTATGGCCG CGCCTACCGC
GTGAAGGACC AGATCAAGGC CGAAGACCTG AAGGCCCGCC TGCATATGAC GCTTGATCAC
GAGGTTGACG TGCTCGAGCA CCAGTTCAAC CGCAACCACG TCGATATGCT GGCGGGCATG
GCGCATTTCA CCGGCCCCAA CGAAGTCGAG GTCGAAGTCG AGGCCGGCGA CACCACCCGC
GTCACCGGCG AGAAATTCCT GATCGCCACC GGCACCCGCA CCTATCGCCC CGACAGCGTG
CCTTTCAACG GCACAACCGT CGTAGACGGC GACGAATTCC TCGAAATGGC GGAAATCCCG
CGCTCGCTCA TTGTAGTGGG GGCTGGCGTC ATCGGTGTCG AATACGCGAC CATGTTCTCG
GCGCTTGATG TGCGCGTCAC CCTGATCGAG CCGCGCGACA CCTTCCTTGA TTTCATCGAC
CGCACGCTCA TCCAGGAGTT CACCCACCAG ATCCGCGAAA ACGGTGTTGA TCTGCGGCTG
GGGTCTGCGA TTGAGAGCAT CGAAGACGAA GGCAGCCACA TTGAGGTCAC GCTGGAAAAC
GGCCGCCACG TGCGTGGCGA GATGCTCTTG TTTGCTGCCG GGCGCATGGG CAACACGGAT
CGCCTGAACC TCAAGGCCGT GGGGCTGGAG ACGGATCATC GCGGCCGCCT TGAGGTGGAG
CGCAAGACCT ATCAGACCAA AGTGTCCCAT ATCTATGCCA CCGGCGATGT GATCGGCCAT
CCATCGCTGG CCTCCACCTC GCTGCAACAG GGGCGGGTTG CGGCCTGTCA TGCGATGGAT
GTGCCCACCG TGCCCGAGAG CCCCTGGTTC CCCTATGGCA TCTACTCAGT GCCGGAAATG
TCCACCTGCG GCATGTCCGA AGAAGAGCTG AAAGAGCGCG GCGTCCCCTA TGAGGTCGGC
ATCGCGCGGT TCCGCGAAAC CTCGCGCGGG CACATCATGG GGCTGGAGCA CGGCATGCTG
AAGATGCTGT TTTCGCTCAA GACCCGCCGG GTGCTGGGCG TGCAGATCGT CGGCGAAGGC
GCGACTGAGC TTATTCACAT CGCACAGGCG GTGCTGAACC TCAAAGGCAC GGTGGATTAC
TTCGTGCAGA ACACCTTCAA TTATCCGACC CTGGCCGAGG CCTATAAGAT CGCCGGGCTT
GATGCCTTCA ACCGGATGCC AATCCCGGAT GAATACAAGG ATCTGCGCGC GCCCTCAAAG
GCCAAGAAAG CCCCGGCCAA AAAGACCGAG ACCAAATCTG CGGCCAAGGA CAAGGCGCCA
GAGTGA
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| Protein sequence | MTETTPQYDY DLIVIGSGPS GRTAAIQAAK LKRRVLVIDR KDRLGGVSVH TGTVPSKTLR
ETVLNLTGWR ERSFYGRAYR VKDQIKAEDL KARLHMTLDH EVDVLEHQFN RNHVDMLAGM
AHFTGPNEVE VEVEAGDTTR VTGEKFLIAT GTRTYRPDSV PFNGTTVVDG DEFLEMAEIP
RSLIVVGAGV IGVEYATMFS ALDVRVTLIE PRDTFLDFID RTLIQEFTHQ IRENGVDLRL
GSAIESIEDE GSHIEVTLEN GRHVRGEMLL FAAGRMGNTD RLNLKAVGLE TDHRGRLEVE
RKTYQTKVSH IYATGDVIGH PSLASTSLQQ GRVAACHAMD VPTVPESPWF PYGIYSVPEM
STCGMSEEEL KERGVPYEVG IARFRETSRG HIMGLEHGML KMLFSLKTRR VLGVQIVGEG
ATELIHIAQA VLNLKGTVDY FVQNTFNYPT LAEAYKIAGL DAFNRMPIPD EYKDLRAPSK
AKKAPAKKTE TKSAAKDKAP E
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