Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3408 |
Symbol | |
ID | 4075582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 428668 |
End bp | 430182 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638004917 |
Product | malonyl-CoA synthase |
Protein accession | YP_611642 |
Protein GI | 99078384 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.787784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAACC CTTTGTTTGA TCGCCTTTTC GGTGTTTACG CCGGCAAGAC GACCCCCTTC TTGTATCTGG CAGATGGCCA GGTCTGGACG CACGCACGTT TTTTGGATCA GGTTGCCCAG ATCGCACATG TGCTCATCAA GGCGGGCCTC ACGCCAGGGG ATCGCGTGGC CGTTCAGGTC GAAAAATCCC CCGAAGCGCT TGCGCTTTAT GGCGCCTGCG TACAGGCCGG TCTGATCTTC TTGCCGCTCA ATACCGCCTA TACCGCCGAT GAACTCTCGT ATTTCATCGA AAACAGTGGT GCATCGCTTG TTATCTGCGA CGGCCAGAAC CAAAGCACGC TGGCCACGAT TGCTGAAGGT CTGAACGCAA GTGTGGAGAC GCTGAACGCA GATGGAAGCG GCTCTTTGAT TGAGCGCGCA GCGGCAATGG CAACGGACTT TGAGACCGTA GACCGCAGCG GCGATGATCT TGCCGCGTTC CTTTATACGT CCGGGACGAC GGGACGCTCC AAAGGGGCGA TGCTGACGCA GGACAATTTA CTGTCGAACG CTGAGACCTT GGTAAAGGAA TGGCGGTTCA CAGATAAAGA CGTGTTGCTG CACGCCTTGC CGATTTTTCA CACGCATGGG CTTTTTGTGG CGAGCAATGT GACGCTTCTG GCCGGAGGCG CGATGATCTT TTTGCCCAAG TTCGATCTGG ACCGCGTCAT CGCGCAACTG CCCAAAGCGA CCAGTATGAT GGGCGTGCCT ACCTTCTATA CCCGCCTGTT GAGCGATCCG CGCTTTACCA AAGAGCTGAC CCAACACATG CGCCTGTTCA TTTCAGGTTC CGCACCCTTG TTGGCGGAAA CCCATATCCA ATTCGAAGAG CGCACTGGGC ATCGGATTCT CGAACGCTAC GGCATGACGG AAACCAACAT GAACACCTCA AACCCCTACG ACGGAGAACG GCGTGCGGGC ACTGTTGGCT TCCCACTGCC CGGTGTGGAG TTAAAGATCA CCAACCCGGA AACGGGTACC TCACTGCCAC GAGGCGACAT TGGACAGATC GAAGTGCGCG GGCCAAACGT CTTTCAAGGA TATTGGCAGA TGCCTGAAAA AACTGCCGCA GAACTGCGAG AGGACGGTTT TTTCATTACC GGCGATCTCG GTATGATCGA CGAAGATGGC TATGTGCACA TTGTGGGCCG CAACAAGGAT CTGATCATTT CGGGTGGGTA CAATATCTAT CCGAAGGAGA TCGAACTGGT GCTGGATGAA CAGTCTGGCG TGTTGGAAAG CGCGGTTATC GGCGTTCCGC ACCCGGATTT TGGCGAAACC GTGCTGGGAA TCATCGTCCC GGAAACGGGT ACCTCACCGG ACCTCGAGTC GATCATGACG TCAGTTCAAG GCCAGCTTGC TCGGTTCAAA CATCCTCGCA AATTGATGGT TGTCGACGAA TTGCCGCGAA ACACGATGGG GAAAGTTCAA AAGAACATCC TTCGAGACAG CTACAAAGAC ATGTTTAGCG ACTGA
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Protein sequence | MANPLFDRLF GVYAGKTTPF LYLADGQVWT HARFLDQVAQ IAHVLIKAGL TPGDRVAVQV EKSPEALALY GACVQAGLIF LPLNTAYTAD ELSYFIENSG ASLVICDGQN QSTLATIAEG LNASVETLNA DGSGSLIERA AAMATDFETV DRSGDDLAAF LYTSGTTGRS KGAMLTQDNL LSNAETLVKE WRFTDKDVLL HALPIFHTHG LFVASNVTLL AGGAMIFLPK FDLDRVIAQL PKATSMMGVP TFYTRLLSDP RFTKELTQHM RLFISGSAPL LAETHIQFEE RTGHRILERY GMTETNMNTS NPYDGERRAG TVGFPLPGVE LKITNPETGT SLPRGDIGQI EVRGPNVFQG YWQMPEKTAA ELREDGFFIT GDLGMIDEDG YVHIVGRNKD LIISGGYNIY PKEIELVLDE QSGVLESAVI GVPHPDFGET VLGIIVPETG TSPDLESIMT SVQGQLARFK HPRKLMVVDE LPRNTMGKVQ KNILRDSYKD MFSD
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