| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3397 |
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| Symbol | |
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| ID | 4075571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 416653 |
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| End bp | 417516 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004906 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611631 |
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| Protein GI | 99078373 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.141396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.659935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCA ATCTCAATCA CCGCAACCGT CGACGTATGC TGAAGGCGCT GCATTTTACC
GGTCTGTTCC TGACCATGGC CGTAATCTGC ATCCCGGGTT TGTGGATCGT CCTCAACTCT
TTCCGCCCCA CGGTGGAGAT CATGGCAAAA CCGCCGGTCT GGACGCCGTC TTTCACGCTC
GAGCATTATC GTGCCATGTT TGGCGGTGCG GGCGAAGGTG GGGTGCCCGT TTTTCAATAC
TTCCGCAATT CCCTGATCGT GTCTGTCACC TCAACCCTGA TCGCGATCCT GATCGGGATG
GCCGGTGGCT ATGCCTTTGC GCGCTACCGT TTCAAAGGCA AAAGCGGGTA TTTTGTCGGG
CTGATGCTGT TTCGCGCGGT GCCGGGCGTG GCGCTGTCGC TGCCACTGTT CATCGTTTTT
GCCCGCGTCG GTATCATCGA TACGCATTTT GGCCTGATCC TCGCCTATGT GGCGATGAAT
GTGCCCTTCA CCATCTGGCT TACGGACGGC TTTTTCCGCC AGATCCCCAA AGAGCTGCAT
GAGGCGGCCG AAATCGACGG CTGCACCCGC TGGCAAGCCT TCTGGCGGGT CGAGTTTCCC
GTCGCGCGCT CGGGCGTGGC CTCTGCCGCG ATCTTTGCGT TCCTCACCTC CTGGAATGAG
TTTGCACTTG CCTCTCAGCT TACCCGTTCG GTCGGCTCCA AGACCATGCC GGTTGGGCTT
TTGGACTTCA CCGCCGAATT TACAATCAAC TGGGGCGGCA TGTGCGCGCT TGCGGTGCTC
ATGATCGTGC CCGCCCTCAT CCTGACCTTC ATCGTACAAA AACACCTGAT CGCCGGTCTC
ACTTTCGGCG GCGTCAAAGG ATAA
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| Protein sequence | MDRNLNHRNR RRMLKALHFT GLFLTMAVIC IPGLWIVLNS FRPTVEIMAK PPVWTPSFTL
EHYRAMFGGA GEGGVPVFQY FRNSLIVSVT STLIAILIGM AGGYAFARYR FKGKSGYFVG
LMLFRAVPGV ALSLPLFIVF ARVGIIDTHF GLILAYVAMN VPFTIWLTDG FFRQIPKELH
EAAEIDGCTR WQAFWRVEFP VARSGVASAA IFAFLTSWNE FALASQLTRS VGSKTMPVGL
LDFTAEFTIN WGGMCALAVL MIVPALILTF IVQKHLIAGL TFGGVKG
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