Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3347 |
Symbol | |
ID | 4075246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 358216 |
End bp | 359319 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638004855 |
Product | oxidoreductase-like |
Protein accession | YP_611581 |
Protein GI | 99078323 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0144127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.198218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGAAA TCGGTATCGG TATCCTTGGG GGTGGCTACA TGGGCAAGGC GCATGCGGTG GCCATGGCCG CGGTCGGAGC GGTCTTCAAC ACGGCTCTTC GCCCTCGCTT GGAAATGGTC TGCGCTTCTT CTCCAGATAG TGCCGAGCGC TATCGGCAGG CCTATGGTTT TGCCCGTGCG ACCGCGGATT GGAGAGAGCT TGTTCACGAT CCACGCGTGG AAGCGGTAGT CATTGCTACG CCACAAGAGG TTCATCGTCA GATCGCAGAG GCATGCTTTG CGTTGGGTAA ACCGGTGCTG TGTGAAAAAC CCATGGGTGC ATCGCTCGCG GACAGTGCAG CCATGGTCGC GGCCGCCGAA GCCTCCGGAG TCGCGAATAT GGTGGGTTTC AACTACATCC GCACCCCTGC GAGCCAATTT GCCCGCGCCC TGGTTGCTGC CGGTGACATT GGTGAGATCA CCTGGTTCCG CGGCGAACAC ACCGAGGATT TTTATGCTAA CCCCGAGACC CCGGCGAGCT GGCGAACCAG TGGCATGGCA AATGGAACCA TGGGGGACTT GGCGCCACAT ATGGTCAATG CGGCACTGGC ACTGATCGGA CCGATCGCGC GTGTCATGGC TGAGGTTGAA ACCGTTCACA AAGAACGACC GGGCGGCCAG GTCACAAATG ACGATCACGC TCAGATGATG TGCCGCTTTG AGAACGGGGC CATGGGGCAG ATGTATTTCA GCCGCATCGC GACAGGACGC AAGATGGGCT ATGCCTATGA GATCACAGGA ACAAAAGGTG CGATCCGCTT TGATCAAGAA GATCAGAACG CGCTGTGGCT CTATCGTATG GAAGGTCCAG AAGCAGAGCG AGGATTCCGC AAGATCCTCA CTGGTCCCGC CCACCCGGAT TACGAACCTT TCTGTCAGGG GCCGGGGCAC GGAACGGGCT ATCAGGACCA GATCATCATT GAGGCGCGGG ATTTCCTGCG CGCGATCGAG ACCGGTGAAG CGCAGTGGCC CACGTTTCGC GACGGGCATG ACGTAAACCG GGTAATCGCT GCGGGGCTGG CCGCATCCGA GAGCAAAACC TGGAAAGATA TCAAAGATTT CTAA
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Protein sequence | MSEIGIGILG GGYMGKAHAV AMAAVGAVFN TALRPRLEMV CASSPDSAER YRQAYGFARA TADWRELVHD PRVEAVVIAT PQEVHRQIAE ACFALGKPVL CEKPMGASLA DSAAMVAAAE ASGVANMVGF NYIRTPASQF ARALVAAGDI GEITWFRGEH TEDFYANPET PASWRTSGMA NGTMGDLAPH MVNAALALIG PIARVMAEVE TVHKERPGGQ VTNDDHAQMM CRFENGAMGQ MYFSRIATGR KMGYAYEITG TKGAIRFDQE DQNALWLYRM EGPEAERGFR KILTGPAHPD YEPFCQGPGH GTGYQDQIII EARDFLRAIE TGEAQWPTFR DGHDVNRVIA AGLAASESKT WKDIKDF
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