| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3338 |
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| Symbol | |
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| ID | 4075237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 349061 |
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| End bp | 349960 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004846 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_611572 |
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| Protein GI | 99078314 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.691581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.62369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTAG ATAATCTCTC TCTGTTTCTC CGCATCGTGG AGAAAGGCGG GCTCGCAGCT
GGCGGGCGAG AACTGGGACT GTCACCGGCG ACCGTCTCGG AACGCCTCGC TGCGCTTGAA
GCCCACTTCG GCGCGCGATT GCTCAACCGC ACAACGAGGT CCATCAGCCT GACAGTAGAG
GGCCGCGAAC TCGTCCATGG CGCCCAGCGG CTGCTTGCGG AAACAGAGGA ACTCGAGTCG
CGGATCCGCC TTGGGACTCA ACAGATTGCC GGGCCGATCC GTGTCAGCGC GCCATCGGAT
TTGGGGCGCA ACCGGCTTGC CCCAATCCTA GACAGGTTCC TAGAGCAGAA CCCAGAGGTC
TCGATCGACC TCCATTTGAG TGATGGTTTT GTGGATATGG CGACCATGGG GCTGGATATG
GCGATCCGCT ATGGTGAGTT GGCGGACAGC AGCCTCATCA TGCGTCGACT CGCGGACAAC
GCGAGGATTG TCTGCGCTGC ACCAAGCTAT CTGGAGGCCA ACGGCACCCC AGGCGATCCT
TTGGATCTGG CGCATCACAA CTGCCTGTTG ATGCGGTTTG GATCGGATGT GGATCGCGCC
TGGCCCTTTG ACATCGATGG GCGCAGGAAA CGCGTTGTGG TGCGTGGAAA CCGCATCGCC
AATGATGGTG ATCTGATCCG CCAATGGGCT CTGGAGGGGC GCGGGATCAT GCGCAAGTCG
CAATGGGATG TGCAGCAGGA CCTCGCAGAG GGGCGGCTTG TGCCACTTCT GCGGAACTTT
GAGGTCGAGC CGATCCACTT GCAGGTGGTA ATGTCGGCGG GAAGACCTCA GCCGCGCCGG
GTGCGCGCCT TGCTTGATAC CATCGTGGCA GAGTTTCAGC CCTCTCGCTC GGACAGTTGA
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| Protein sequence | MLLDNLSLFL RIVEKGGLAA GGRELGLSPA TVSERLAALE AHFGARLLNR TTRSISLTVE
GRELVHGAQR LLAETEELES RIRLGTQQIA GPIRVSAPSD LGRNRLAPIL DRFLEQNPEV
SIDLHLSDGF VDMATMGLDM AIRYGELADS SLIMRRLADN ARIVCAAPSY LEANGTPGDP
LDLAHHNCLL MRFGSDVDRA WPFDIDGRRK RVVVRGNRIA NDGDLIRQWA LEGRGIMRKS
QWDVQQDLAE GRLVPLLRNF EVEPIHLQVV MSAGRPQPRR VRALLDTIVA EFQPSRSDS
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