| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3328 |
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| Symbol | |
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| ID | 4075733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 337576 |
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| End bp | 339660 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004836 |
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| Product | hypothetical protein |
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| Protein accession | YP_611562 |
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| Protein GI | 99078304 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.901171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.708038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCA AAGAGCCTGC ACAGCTAAAG ATTTCAGATC AACGCCCTTC AATGTGGCGC
AACCTCTCAC TGGTCTGGCT CGTGCCCCTG CTGGCCCTGA TCGTATCGCT TGGCATCGCC
TGGAAGAGCT ATTCAGAGCG CGGCGAGTTA ATCCACATCG CTTTTGACAA TGGCTCTGGG
GTGGTCGCCA ATGAAACCAC GCTGCGCTAT CGCGATGTGG TGATTGGCCG GGTGGAGCAG
GTCGGCTTCT CCGAGGACCT GAGCCGTGTT TCAGTTGCCG TTCGCGTCGA CACGGACATC
GCTCCCTTTC TGGATGAAGA TGCGACCTTC TGGGTGGTGC GCCCGGAGGT GAGTTCGCGC
GGGATCTCGG GGCTGAGCAC GGTGCTGTCC GGCGTCTATA TCGAAGGCGC CTGGGACGAG
ACCGCCGGAT CCGCGCAGAC CGAATTTGTG GGGCGGGATC GCCCCCCTCT GGTGCAGCCC
GGACGCGCCG GGCGCCGGAT TACCTTGCGG ACCGAAGATG GCAGGATGAT CACCGAGGGC
GCGCCTGTCC TGTTTCGCGG CATCGAAGTG GGCCGCCTTG AACACCCCCG CCTGACCGTA
AGCGGCAACA GCATCGTGGT GGATGCCTTT ATCGAGGCAC CGCACGATCG CCGGATCAAC
TCGGCCACGC GCTTTTGGGA TACCTCCGGC TTTACCGTCT CCTTTGGAGC GGAAGGGCTG
TCTTTGGATG TCGACAGCCT TGCATCCCTT GTTTCCGGCG GGATCGAATT CGACTCTGTC
TTTGATGGCG GCAGCCCGGC GAACCCCGGC GCGGTCTTTG ACATCTATCC AGATGAGGCC
ACCGCAAGGC GCACTGCTTT TGCGCGTTCC ATGGCCGGTG GCGTTGCGAT CTCTGTAGCG
TTTGACGACT CTGTTGCGGG TCTGAGCAGT GGTGCACCCG TAGAGCTCGG CGGTATCAAG
GTAGGCGAAG TCGGCAGCCT CACCGCCGCG ATCCAGAATG AGACCGACAC GGCAGATGTC
AAACTGGTGG CCAAACTCCT GCTGCAACCC GGATTGCTGG GTCTTGCGCC AGGTGCCAAC
GAAGAGGACG TTTTGGACTT TCTTGAGACC GCTGTTGAGG GTGGAATGCG GGCGCGTCTC
GCTTCTGCCG GACTCCTGAG TTCAGAGCTG ATGGTAGAAC TGGTGCGCCT CGATGATGTC
CCTCCCGCCA GATTTGATCG CACAGCAGAG CCCTTCCCGG AAATGCCAAG CGCGCCATCG
GATCTGCCTG ATTTCTCTGC AACAGCAGAA GGCGCGATGG AACGGATCAG CCAGCTTCCG
GTGGAGGAAT TGATGGCGCA GGCGATCAAT ACCTTGGCCA GCATCGAGGC TCTGGCCGCC
GCCGAAAGCA CCCGGCAGGC CCCGGCAGCT GCTGTGGCTC TCTTGGAAGA AACCCGCGCC
CTGCTGAACG ATCCAAGCAC ACGCGCCCTG CCCGGAGAGC TGCGCGCCAC CGTCTCAGAT
CTGCGTGCAA TCCTGCAGGA GTTGCAACAG GGACGCGCCG TTGCGAACCT GACCGCTGCG
CTTCAAGATG GGGCGCGGGC CGCAGATGAG ATCGCGACAG CCTCAGAGAA TCTGCCCGCG
TTGGTGGACG ATCTGCGCGA CCTTGCCGCC AAAGCCAACA ACCTTGAAGC GGAAGAGCTG
ATCCAATCGG TCAACACGCT GATGACCAGT GCAGATGCGC TGATTGGCAC AGAGGCGGCT
CGTGCGCTTC CAAGCTCATT GTCGGCGGCG CTCGAGGAAA TCCGCACCAC TCTCGCGACA
CTGCGCGAGG GCGGATTAGT CGACAACGCA AATGCCACCA TGGTCTCGGC CCGCGATGCC
ACGCAATCGG TTGCGCAAGC CGCAGAAGGC CTGCCCGCGC TCTCCGCGCG GCTGGAGCGC
CTCATGACCC GGTCAGAATC GCTGGTGGCG GCCTATGGGG ATCGCTCCAA TTTCAATATG
GAAACGCTCG ATATGCTCCG CGAAATCAAA TCCGCAGCGC GCGCGGTCTC GCAGCTTGCC
CGCAAGATCG AACGGGATCC GAACTCACTG GTATTTGGTA GATGA
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| Protein sequence | MNPKEPAQLK ISDQRPSMWR NLSLVWLVPL LALIVSLGIA WKSYSERGEL IHIAFDNGSG
VVANETTLRY RDVVIGRVEQ VGFSEDLSRV SVAVRVDTDI APFLDEDATF WVVRPEVSSR
GISGLSTVLS GVYIEGAWDE TAGSAQTEFV GRDRPPLVQP GRAGRRITLR TEDGRMITEG
APVLFRGIEV GRLEHPRLTV SGNSIVVDAF IEAPHDRRIN SATRFWDTSG FTVSFGAEGL
SLDVDSLASL VSGGIEFDSV FDGGSPANPG AVFDIYPDEA TARRTAFARS MAGGVAISVA
FDDSVAGLSS GAPVELGGIK VGEVGSLTAA IQNETDTADV KLVAKLLLQP GLLGLAPGAN
EEDVLDFLET AVEGGMRARL ASAGLLSSEL MVELVRLDDV PPARFDRTAE PFPEMPSAPS
DLPDFSATAE GAMERISQLP VEELMAQAIN TLASIEALAA AESTRQAPAA AVALLEETRA
LLNDPSTRAL PGELRATVSD LRAILQELQQ GRAVANLTAA LQDGARAADE IATASENLPA
LVDDLRDLAA KANNLEAEEL IQSVNTLMTS ADALIGTEAA RALPSSLSAA LEEIRTTLAT
LREGGLVDNA NATMVSARDA TQSVAQAAEG LPALSARLER LMTRSESLVA AYGDRSNFNM
ETLDMLREIK SAARAVSQLA RKIERDPNSL VFGR
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