| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3324 |
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| Symbol | |
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| ID | 4075729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 333330 |
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| End bp | 334019 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004832 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_611558 |
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| Protein GI | 99078300 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.106017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGGCA AACGCGCGGT TTCTCGCAAC ACCCTTCCGG ATGTCATTGC CAATGATCTG
CGAGAGCGCA TCCTCAGCGG TGAGCTCGCC GAAGGCGAGA TCATTCGCCA AGAAAGCCTA
GCCGATGAAT ATGACGTCTC GCGCATGCCC ATTCGCGAGG CCCTGAAACG CCTGGATGCC
GAAGGGCTGG TTCAATTCAC CAACAACCGC GGCGCTTCAG TCACTAAGCA CTCCCTGCCG
GAGATTGCCG AGATCTTTGA CCTGCGCATC CTGATCGAAG TCGATCTGTT CCGCCGCGCG
ATCCCGGCTA TGACCTCCAC GGATTTTGCC CTGTGCAATC AACTGCTCGA GGAAATGGAC
GCCTCCTATG ATGCCAACGA TGTGGGCAAA TGGGGGACCT TGAACCACCA GTATCACTCG
GCGCTTTATG CAGCTGCGGA TCGCAAGTTG ACCAATGACG TGCTGCAGGG GATCAGCCTG
CACTCGGATC GGTTCGTGCG GATGCATCTG AGCGTGATGG AGCAACGCGA ACCCGCCAAG
AAAGAGCATC GCGACCTGCT GCGTTACGCC GAGGCGCGGG ATGTCGAAAA AGCCTGCGCC
GCGCTGCGCG ATCACATCAC GCGCACCAAG GATGCCTTGC TGCGTCTTGT TGCCGAAAAC
CGCGCTCTGG CAGGCGATCA AGCCAACTGA
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| Protein sequence | MAGKRAVSRN TLPDVIANDL RERILSGELA EGEIIRQESL ADEYDVSRMP IREALKRLDA
EGLVQFTNNR GASVTKHSLP EIAEIFDLRI LIEVDLFRRA IPAMTSTDFA LCNQLLEEMD
ASYDANDVGK WGTLNHQYHS ALYAAADRKL TNDVLQGISL HSDRFVRMHL SVMEQREPAK
KEHRDLLRYA EARDVEKACA ALRDHITRTK DALLRLVAEN RALAGDQAN
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