Gene TM1040_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3316 
Symbol 
ID4075721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp324875 
End bp325687 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID638004824 
Productmetallophosphoesterase 
Protein accessionYP_611550 
Protein GI99078292 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0363179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.485488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCT TCATTCAACT CACTGACACG CATATCGTCT CTGAAGGTTC ACTCGCCTAC 
GGGCGCTCGG ATACCGCGAC GGCGCTGGCG CGCGCGGTGG ACACAATCAA CAGCAGACTG
CCGGTCCTCG ATCCCGTGGA CTGCGTGGTG GTGACAGGCG ATCTAACGGA TCACGGCAGC
GCGGAGGAAT ATGCACATCT GCGCCAACTG CTTGCGCCAT TGAACGTGCC TGTGCGGGCT
ATCCCCGGCA ACCACGACAC GCGCGAGGCC ATGCGTGCAG CTTTCGCCAC CGAAGATTGG
ATGCCTGCGT CTGGCCCAAT TCAATGGCAT CACGATTTTG GTCCCTTTGC GATGGTGGGC
CTCGACACAT TGGTTGAGGG CGCTCCCTAC GGGATGGTGT GTGAGGCCGG GCTTGGGTTT
CTGGCGCGTA GTCTGAAGAC CACCCCAGAC AAGCCGCTTG TGGTCGCCAC GCATCATCCT
TGGATCCCTT CGGGTATGGC AGATATGGAC CGCAACAATC TGCGCAACGG GCCCGCAATG
CTGGATCTTC TGCGTGAGCA TGACGCCCCG GTGCACGTAA TCTCCGGCCA CCTGCACCGC
GCCATGAGCG CGCTCGTCGA CGGGGTGCTG CATCAGGTGG CCCCCGCACC CTGCCATGCG
GTGCATCTCG ATCAGCGCGC AGATGCGGTA AACAGCCTTG TACTGGAGCC GGGTCAAGTG
ACGGTCTACA ACTGGCACGA CGTCACAGGC GGCCTGGTCA GCGACTTGCT TCCCATCGGA
GATTATCCCG GCCCTTGGCC CTTCTATGAC TGA
 
Protein sequence
MTSFIQLTDT HIVSEGSLAY GRSDTATALA RAVDTINSRL PVLDPVDCVV VTGDLTDHGS 
AEEYAHLRQL LAPLNVPVRA IPGNHDTREA MRAAFATEDW MPASGPIQWH HDFGPFAMVG
LDTLVEGAPY GMVCEAGLGF LARSLKTTPD KPLVVATHHP WIPSGMADMD RNNLRNGPAM
LDLLREHDAP VHVISGHLHR AMSALVDGVL HQVAPAPCHA VHLDQRADAV NSLVLEPGQV
TVYNWHDVTG GLVSDLLPIG DYPGPWPFYD