| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3263 |
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| Symbol | |
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| ID | 4075405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 263788 |
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| End bp | 265257 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004772 |
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| Product | succinate semialdehyde dehydrogenase |
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| Protein accession | YP_611499 |
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| Protein GI | 99078241 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.132134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTC CAACTTCCCT CTCCCTGCGC GATCCGAGCC TGCTGGAAAC CCGCGCCTAT
GTGAACGGCC AGTGGATCAA TGGCGCCACC ACTTTTGATG TCATCGACCC AGCAACCGGG
CGACTGGTGG CGGAGGTGGC CGATCTAGAT GTGGCTGCCG CCGCCAAAGC GGTGGACGCC
GCCCACGCCG CCGGACCTTC GTGGGCAGCC CTCGCTGGCA AGGAACGCAG CAGTATCCTG
CGTCGCTGGC ACGATCTCTT GGTTGAGAAC GCAGACGACC TTGCCACCAT ACTCACCGCC
GAGATGGGTA AACCCTGGGC TGAAGCACGT GGCGAGATCC TCTATGGCGC CTCCTTCATC
GAATGGTTCG CCGAAGAAGC AAAACGCATC TACGGCGATG TCATTCCTGG CCCGCAGCGT
GACAAGCGCA TCATGGTGCT GAAGCAACCC ATCGGCGTCG TGGGTTCCAT CACGCCATGG
AATTTTCCCA ATGCCATGAT TGCGCGCAAA GTTGGCCCGG CGCTGGCTGC AGGCTGCACC
TTTGTCGCCC GCCCCGCAGA GCTGACCCCC TTGTCGGCGC TGGCGATGGC GGTACTGGCC
GAGCGGGCCG GGATTCCTGC GGGTGTTTTC AATGTGATCC CTTCCAATGA TGCGCCGGGG
GTGGGGCGAG AGCTCTGCAC CAATCCGAAG GTGCGCAAGA TCACCTTTAC CGGCTCCACG
CGTGTCGGAC GCATCCTGAT GGAACAAGCT TCTGGCACCA TTAAGAAAAT GTCGCTCGAG
CTTGGTGGAA ACGCACCCTT CATCGTATTT GATGATGCCG ATCTCGATGC GGCGGTCGAG
GGGGCGATGA TCGCGAAGTT CCGCAACAAT GGTCAGACTT GCGTCTGCGC CAATCGCATT
TACGTGCAGG CCTCGGTCTA TGATGCCTTT GCGGAGAAAC TGGCCGGAGA GGTGAAGAGC
TTGCAGGTCG GGAACGGCTT TGATGACGCC ACGACTGCAG GCCCCCTGAT CAACGAAGCC
GCCCTGCGCA AGGTTGAGGC GCATATCTCC GATGCGGTGG GCAAAGGCGC GCGGATTGTC
ACCGGCGGGC ACCGCTCGGA TCTGGGCGGA ACGTTCTTTG AGCCCACCGT GCTGCGCGAT
GTGAACCCGC ATATGGTGGT GTGCCACGAG GAAACCTTTG GCCCGCTTGC CGCGTTAGTA
CGCTTTGACA GCGAAGAAGA GGTGATCGCC CTAGCCAATG ACAGCGAGTT TGGTCTTGCC
GCCTATTTCT ATGCGCGGGA TCTCAGCCGG GTCTGGCGGG TTGCCGAGTC CCTCGAAAGC
GGGATGGTCG GAGCCAACAC CGGCCTCATC TCAACCGAGG TCGCTCCCTT TGGTGGCATC
AAACAATCGG GCCTCGGACG CGAAGGGTCA AAATACGGGA TCGACGATTT TGTTGAGCTG
AAGAACATCT GTCTCGGGGG AATGAGCTGA
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| Protein sequence | MSTPTSLSLR DPSLLETRAY VNGQWINGAT TFDVIDPATG RLVAEVADLD VAAAAKAVDA
AHAAGPSWAA LAGKERSSIL RRWHDLLVEN ADDLATILTA EMGKPWAEAR GEILYGASFI
EWFAEEAKRI YGDVIPGPQR DKRIMVLKQP IGVVGSITPW NFPNAMIARK VGPALAAGCT
FVARPAELTP LSALAMAVLA ERAGIPAGVF NVIPSNDAPG VGRELCTNPK VRKITFTGST
RVGRILMEQA SGTIKKMSLE LGGNAPFIVF DDADLDAAVE GAMIAKFRNN GQTCVCANRI
YVQASVYDAF AEKLAGEVKS LQVGNGFDDA TTAGPLINEA ALRKVEAHIS DAVGKGARIV
TGGHRSDLGG TFFEPTVLRD VNPHMVVCHE ETFGPLAALV RFDSEEEVIA LANDSEFGLA
AYFYARDLSR VWRVAESLES GMVGANTGLI STEVAPFGGI KQSGLGREGS KYGIDDFVEL
KNICLGGMS
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