Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3236 |
Symbol | |
ID | 4075378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 236860 |
End bp | 237690 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638004745 |
Product | phosphonate ABC transporter permease |
Protein accession | YP_611472 |
Protein GI | 99078214 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAGTC TCTCCGAACC GCATTCCCTC TCCGAGGCGC TGGAGGCCCG GGATGACTGG GCACGTTTCA CGCCGAAGCA ACGCCTGATC CGCTACGCGG GGTTCGCCGC CGCAGCCGCA GTCGTAGCTT GGGCATTGGG CAGCATCGAC GTGATCTGGG CCTGGGTCTG GGACTCGCCA GCGCAGATGG CGGACCTTTT TGGACGCATG ATGCCGCCGG ACCCCTCCAA CCTGCCCAGC ATCCTGACGG CCATCTGGCA GACCGTGAAT ATTGCCACAT TGGCCACCTT GATCGCGGTC TTTGTCTCGC TGCCTGTGGC CTATATCGCG GCGCAAAACA CCACGCCGAA CCGCGCCTGC CTCTGGTTGG GCCGTTTCAT CCTTGTGTCT TCCCGGTCGG TGAACACGAT CATCTGGGCG CTTCTCTTTG TGGCCATCTT CGGCCCCGGC ATCGTTGCAG GGATCGTTGC GATCATGTTC CGGTCTATTG GCTTTTTGGG CAAATTGCTT GGCGAAGCGA TCGAGGAAAT CGACCGCAAA CCGGTCGAAG CGCTCGAGGC CTGCGGAGCA TCGCAATTCA AGATCGTGCT CTACGCTATC GTGCCTCAAG TCATGCCCGC ATTCTTTGCG GTTTCGATCC TACGCTGGGA TATCAACCTG CGTGAAAGCA CCGTACTGGG GCTCGTGGGT GCGGGCGGCA TCGGGATGAT CCTGCAGGGC GCGATTGACA CATTCAACTG GCCAGAGGTG TCGATGGTTT TGCTCACGAT CCTGGCGCTG GTCATCTTTG GAGAGATGGT ATCGTCTTTC CTGCGTCGCA AGATCCTGTA A
|
Protein sequence | MKSLSEPHSL SEALEARDDW ARFTPKQRLI RYAGFAAAAA VVAWALGSID VIWAWVWDSP AQMADLFGRM MPPDPSNLPS ILTAIWQTVN IATLATLIAV FVSLPVAYIA AQNTTPNRAC LWLGRFILVS SRSVNTIIWA LLFVAIFGPG IVAGIVAIMF RSIGFLGKLL GEAIEEIDRK PVEALEACGA SQFKIVLYAI VPQVMPAFFA VSILRWDINL RESTVLGLVG AGGIGMILQG AIDTFNWPEV SMVLLTILAL VIFGEMVSSF LRRKIL
|
| |