| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3219 |
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| Symbol | |
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| ID | 4075361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 215137 |
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| End bp | 216363 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004728 |
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| Product | Rieske (2Fe-2S) region |
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| Protein accession | YP_611455 |
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| Protein GI | 99078197 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.201195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGCA ATATCAACAC GCTGATCGCT AACCACCGCG CAGGACATGC ACTTGATCAG
GCGTTTTATA CCGATGCCGA GGTGTTTCAG ACCGATCTTC AGGAGATCTT TTACAAAGAA
TGGCTTTTTG CCATTCCCGC CTGCGAGCTG GACAAGCCAG GGAGCTACGT CACCCATCAG
GTTGGCAACT ACAATGTGAT CATCGTGCGC GGTGCAGACA ATGTCATTCG GGCTTTCCAC
AATGCTTGTC GTCACCGTGG CTCGGTGATC TGCAAGGCGA AGAAAGGCAA CAACCCTAAG
CTCGTCTGCC CCTATCACCA GTGGACTTAT GAACTGGACG GTCGTCTGCT GTGGGCGCGT
GATATGGGGC CTGATTTCGA GCCGAGCAGA CATGGGCTCA AGACGGTCCA CTGCCGTGAG
CTTGCTGGGT TGATCTATAT TTGTCTCGCC GATGAGGCCC CGGATTTTGA ACGGTTTGCC
GAGGTCGCCC GCCCCTATCT GGAGGTTCAT GACCTCTCGA ACGCCAAGGT CGCCCATGAA
AGCTCCATCG TGGAGCGCGG CAACTGGAAG CTGGTCTGGG AGAACAACCG CGAGTGCTAC
CACTGCGGCG GCAATCACCC CGCGCTCTGC CGGACCTTCC CGGATGATCC CTCCGTGACG
GGCATCGAAG GTGGCGAGAC CCCGAGCAAT TTGCAGGCTC ATTTCGACCG CTGTGAGCAG
GCTGGGATGC CTTCGGGGTT CCACCTCAGC GGTGATGGCC AGTTCCGTGT CGCGCGCATG
CCCCTGAAAG AAGGCGCTGA GAGCTACACG ATGGACGGCA AGACCGCCGT GCGTCGCTGG
CTGGGCCGTG CAGCCTTTGC GGATGCGGGC TCGTTGCTCA AGTTCCACTA CCCGACCACT
TGGAACCACT TCCTGTCGGA CCATTCGATC GTGTTCCGGG TCACGCCCAT CAGCCCCACG
GAAACCGAGG TGACGACAAA ATGGCTGGTT CACAAAGACG CGGTTGAAGG TGTGGATTAC
GATCTACAGC GGCTCACCGA GGTTTGGATT GCCACCAATG ACGAAGACCG CGAGGTTGTG
GAGTTCAACC AGATGGGGAT CAACTCGCCG GCCTATGAAC CGGGGCCCTA TTCCCCGACC
CAAGAGAGCG GCGTCCTGCA ATTTGTGGAG TGGTATCTCT CTACCCTCAA ACGCAACAGC
GGCCCACACG CCGTCGCAGC GGAGTGA
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| Protein sequence | MHSNINTLIA NHRAGHALDQ AFYTDAEVFQ TDLQEIFYKE WLFAIPACEL DKPGSYVTHQ
VGNYNVIIVR GADNVIRAFH NACRHRGSVI CKAKKGNNPK LVCPYHQWTY ELDGRLLWAR
DMGPDFEPSR HGLKTVHCRE LAGLIYICLA DEAPDFERFA EVARPYLEVH DLSNAKVAHE
SSIVERGNWK LVWENNRECY HCGGNHPALC RTFPDDPSVT GIEGGETPSN LQAHFDRCEQ
AGMPSGFHLS GDGQFRVARM PLKEGAESYT MDGKTAVRRW LGRAAFADAG SLLKFHYPTT
WNHFLSDHSI VFRVTPISPT ETEVTTKWLV HKDAVEGVDY DLQRLTEVWI ATNDEDREVV
EFNQMGINSP AYEPGPYSPT QESGVLQFVE WYLSTLKRNS GPHAVAAE
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