Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3184 |
Symbol | |
ID | 4075354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 169278 |
End bp | 170225 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638004687 |
Product | hypothetical protein |
Protein accession | YP_611420 |
Protein GI | 99078162 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.546579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.703778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATCT TGATTCTCAT GGTGGTTCAG ATGGCCTTCT CACCCGATAC CGCGCTGCCG CTCCCCACGG CGGCGCTTTA TGCAAAACTC ACCGCAACTG CGGTTTTCTG GGGCGGCACC TTTGTGGCCG GACGCGCATT GGCGGGACAG CTTGATCCGC TGGCCTCGGC AACCGGGCGG TTTGGAATCG CCGTGCTTTG CCTGCTTGTG CTGACCCGCT GCGTCGAAGG CGGCCTGCCG CGCCTCACCC TCAGCCAGCT GGGGCTGACC CTCGGGCTCG GTCTGACCGG CGTTGTGTCT TACAACCTGT TCTTCTTTGC GGCGCTGACC GAGATGCCCG CATCGCGCAC CGCATTGTTT GTGACTTTCA ACCCGATCTC TGTCACCGTT GTCATGGTTG TTTTCGGGCA GGAGAGGATG ACACTGCGGC AGGTCGCGGG CATTCTCGTA GCGCTGTTTG GTGCACTGGT CGTCATCAGT AAGGGCGATC TCCTGCATGT CTCGATGCAT TTTGGGCGCG GTGAGGCCTA TATGTGCGGC GCTGTGTTGA GTTGGGTGGG CTACACGGTG ATTGGTCGCA GTGCGATGCG GCAGCTCAGC GCTCTGGCGG CGACCACATA TGCCGCGCTC TGGGGGTTTG CGATATTGGC GGGGGCTCTG CTCTGGTCGG TGTACTGGTC TGGGCACGGG CCAGCGCCGC AGGGCCTGCG CCTCGATGTG GCCGCCGCGC TTTTTTATCT TGCGATTGGC GGGACTGTCG TCCCCTTCGT TTGGTATTCC GAAGGCATCC GTGCGCTCGG CGCCGGGCGG GCGGCGGTTT TCAACAATCT GGTTCCCTGT GCGGGCGTGC TTCTGGGTTT TGTGATCCTG AGTGAGCCCC TGACCGCTGC GATGCTTGCT GGCGGCGGCG TAGTTATCCT CGGTGTCGCG CTCACCAACC GAGGCTGA
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Protein sequence | MSILILMVVQ MAFSPDTALP LPTAALYAKL TATAVFWGGT FVAGRALAGQ LDPLASATGR FGIAVLCLLV LTRCVEGGLP RLTLSQLGLT LGLGLTGVVS YNLFFFAALT EMPASRTALF VTFNPISVTV VMVVFGQERM TLRQVAGILV ALFGALVVIS KGDLLHVSMH FGRGEAYMCG AVLSWVGYTV IGRSAMRQLS ALAATTYAAL WGFAILAGAL LWSVYWSGHG PAPQGLRLDV AAALFYLAIG GTVVPFVWYS EGIRALGAGR AAVFNNLVPC AGVLLGFVIL SEPLTAAMLA GGGVVILGVA LTNRG
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