| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3110 |
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| Symbol | |
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| ID | 4075557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 80347 |
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| End bp | 81519 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638004612 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_611346 |
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| Protein GI | 99078088 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAT TCGTGACCGG GCCTGCGGCC CGCGACGACG TGACTTTTGT CCCCCGCCAC
CTGCAGTATA TCGCAAACAC CCGGTTCGAG CGCCCGACGC TTGTGATCGA CAGCGAAGCC
GTGGCGCGCC AGTACATGGG TCTTGCCCGG GGTCTGGGGC GTGCGCGTAT TCACTACGCG
GTCAAGGCCA ACCCGGCGCC TGAAATCCTG CGCCGTCTCT GCGCGTTGGG GTCGAATTTC
GATGCCGCCA GCCGCGCCGA GATCGAAATG TGCCGCGCCG CCGGCGCCTC TGCTGCGCGC
ATCACTTTTG GCAATACCAT CAAGAAACCC GCCGACATCG CTTTTGCGCA TGCGCTGGGG
ATCACTCATT TTGCGGCGGA TGCGGTCGAG GAGCTGGAAA AGCTCGCCGA ACACGCGCCG
GGCGCCCATG TCTGCATTCG CATCCTCGTA GAGGCCTCCT CGGCCGATTG GCCGCTCAGC
CGCAAGTTCG GCTGCGCGCC GGATATGGCG GTGGGTCTGA TGGATCGCTG CGTGGCGCTT
GGCCTGGTCC CGCATGGCCT GTCGTTTCAT GTGGGTTCTC AAACCCGCAA GCCCGAGATG
TGGGAGCCGA TCCTCGATCA GGTTGCCGAC GTCTGGCAGG CGGCGCGTGC GGCGGGGCAT
GATCTCAAGC TTCTGAACAT CGGGGGCGGT TTCCCGGCTG GCTACCGTGA TGCCGTGATG
GCGCCGCAGG ACTACGCCTC TGAGGTGATG AAACGCGTGA ATGCCCGTTT CCCGGATGCG
GCCGAAGTGA TGGCAGAACC CGGTCGTGGT CTGGTGGCCG AAGCCGGCGC AATCGCCGCC
GAGGTCATGC TGGTATCGCG TAAGCACGAC AGCGATCTTC ATCGTTGGGT CTATCTCGAC
ATTGGCAAGT TCTCCGGCCT TGCGGAAACC ATGGACGAGG CGATCCGCTA CAAGATCACC
ACCGACCGCG ATCATGAAAC CATGGGCGCC TGTGTGCTGG CAGGCCCGTC CTGCGACAGC
GCCGATGTGC TCTATGAAAA ACAACCCGTT CAGCTGCCGC TGGGGCTGAC GTCGGGCGAC
CGTGTGGTGA TCCACTCTTG TGGGGCCTAC ACCACCACCT ATGCCTCGAT CGGGTTCAAC
GGCTTCCCGC CGCTGGATGT CGTGGTGCTC TGA
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| Protein sequence | MTVFVTGPAA RDDVTFVPRH LQYIANTRFE RPTLVIDSEA VARQYMGLAR GLGRARIHYA
VKANPAPEIL RRLCALGSNF DAASRAEIEM CRAAGASAAR ITFGNTIKKP ADIAFAHALG
ITHFAADAVE ELEKLAEHAP GAHVCIRILV EASSADWPLS RKFGCAPDMA VGLMDRCVAL
GLVPHGLSFH VGSQTRKPEM WEPILDQVAD VWQAARAAGH DLKLLNIGGG FPAGYRDAVM
APQDYASEVM KRVNARFPDA AEVMAEPGRG LVAEAGAIAA EVMLVSRKHD SDLHRWVYLD
IGKFSGLAET MDEAIRYKIT TDRDHETMGA CVLAGPSCDS ADVLYEKQPV QLPLGLTSGD
RVVIHSCGAY TTTYASIGFN GFPPLDVVVL
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